| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2372 |
|---|
| Symbol | |
|---|
| ID | 8120784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 2718425 |
|---|
| End bp | 2719432 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644852756 |
|---|
| Product | HCP oxidoreductase, NADH-dependent |
|---|
| Protein accession | YP_003004692 |
|---|
| Protein GI | 251789971 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC CTACTCCGCA GTGCCCCAAC CGTATGCAGG TGCACTCCCT TCATCAGGAA
ACGCCGGATG TGTGGACGAT TTCCCTGATT AGCCATGATT TTTATCCCTG GCAACCGGGC
CAGTACGCAC TGGTCAGCAT CGCCAACAGC AGTGAAACGC TGCGTGCTTA TACGTTGTCC
TCCTCACCGG GGCTTAGCCC GTTCATCACC TTCACCGTAA GGCGACTGGA AAACGGCACC
GGCTCGCGCT GGCTGACTGA ACAGGTAAAA CCGGGCGACT ATCTGTGGAT CTCCGATGCG
CAAGGCGAAT TTACCTGTAC CCACGCCGTC AGCGACCGTT ATTTAATGCT GGCCGCAGGC
TGTGGCGTAA CGCCGATTAT GTCGATGACG CGCTGGTTGC TGGCCAACCG CCCGCACACC
GATATTCAGG TGATTTTCAA CGTCCGCGAC CCGCAACACG TGATTTTTGC TTCACAATGG
CAAGCGCTCA GCCAGCGTTA CCCACAGCAG TTGAAACTGA CGCTGATGGC GGAACAGCAG
GCTGAAGCCG GTTTTCTCAG CGGGCGGCTG ACCGAGTCGG TGCTGTTGCA GCAAGTACCG
GATATCGCCA GCCGTACTAT GATGACATGT GGCCCGCAGC CTTATATGAA GCAGGTGGAA
ACATTTTGCA TACAGGCCGG CGTGCCGCGC GATCGTATTT TCAAAGAGCA GTTCGGTGCT
ACGGATGCCG ACGTGGACGA TGACGGCGAA CAACTCACCA TGACGATTCG TCATTCATTG
CAACAGTTGA AAGTCCCGGT CGGCATCAGC CTGTTGGCGG CGCTGGAAAA CCATCAATTA
CCGGTCAACG CGGCCTGTCG CGCCGGCGTG TGCGGTAGTT GCAAGACCCG TATTATCAGC
GGCAACTACA CCACCACCAG CACCATGACA TTGACGGCCG AAGAGATTGA AAACGGCTAT
GTGTTGGCCT GCAGTTGCCA GCTACAAGGC GACGTCGAAC TGGCCTGA
|
|---|
| Protein sequence | MTMPTPQCPN RMQVHSLHQE TPDVWTISLI SHDFYPWQPG QYALVSIANS SETLRAYTLS
SSPGLSPFIT FTVRRLENGT GSRWLTEQVK PGDYLWISDA QGEFTCTHAV SDRYLMLAAG
CGVTPIMSMT RWLLANRPHT DIQVIFNVRD PQHVIFASQW QALSQRYPQQ LKLTLMAEQQ
AEAGFLSGRL TESVLLQQVP DIASRTMMTC GPQPYMKQVE TFCIQAGVPR DRIFKEQFGA
TDADVDDDGE QLTMTIRHSL QQLKVPVGIS LLAALENHQL PVNAACRAGV CGSCKTRIIS
GNYTTTSTMT LTAEEIENGY VLACSCQLQG DVELA
|
|---|
| |