Gene Dd1591_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2348 
Symbol 
ID8120760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2688115 
End bp2689263 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content54% 
IMG OID644852733 
Productputative MFS family transporter protein 
Protein accessionYP_003004669 
Protein GI251789948 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.883707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACCT ATACGCGCCC GGTTTTACTG CTGCTCTGCG GGCTGTTGCT GCTTACTGTT 
TGTCTGGCTG TTCTCAATAC GCTGGTACCA TTGTGGCTTA ATGATCGTCA ATTGCCGGTT
TGGCAGGTTG GCGTGGTCGG TTCGGCCTAT TTCAGCGGGA ATTTGGTCGG TACGTTGGCG
GCGGGCGGGT TGATCCGACG TTATGGTTTT AACCGTAGCT ATTATCTGGC TGTGCTGCTG
TTTGGGTTGG CGACGGCGGC GCTGGCGTTG TCTTCGGATA TCGGGAGCTG GATTCTGTGG
CGTTTTGTCG CCGGTATTGC CTGTGCGCTG ATTTGGGTGG TTGTAGAAAG TGCTCTCCTT
TGCAGCGGCA ATGCACTTAA TCGCGGTCAA CTGCTGGCGG CGTATATGAT GGCGTACTAT
CTGGGCAGCG TAATGGGGCA ATTGCTGCTT GGAATAGTGC CTACGGCATT GCTCAGTATT
TTGCCCTGGC TGGTGGCGCT GGTATTACTG GCGGCGTTAC CTTTGCTGTT TGCACGTATT
CCGCCGCCGC AGCCTGTGAC GCAACGCGTT AACGTCTGGC GAATGCTACG CTATCGCTCC
GCCCGTTTGG GCATCCAGGG TTGCGTCATT TCCGGGGTTA TTCTTGGTTC ACTGTATGGA
TTGATGCCGT TGTATCTTGC GCATCAAGGT ATGAGCGATG CCAGTGTAGG CTATTGGATG
GCGTTATTAA TCAGTGCGGG TATTCTGGGG CAATGGCCGG TCGGGCGGCT GGCGGATCGT
TATGGCCGAT TGTTGGTGCT GCGTGTACTG GTTTTTGCGG TGATTCTTGG CTCACTGGCC
ATGTGGCTTC CAGGGCGATA TAGCATGGCG CCGTCGTTGT TTTTGCTCGG TGCCGCCGGT
TTTACGCTCT ATCCGGTTGC GATGTCATGG GCGTGTGAGA AGGTGGCGCC TAATGAACTG
GTCGCCATGA ATCAGGCATT ACTGCTGAGC TACACCATTG GTAGTCTCTG TGGGCCAAGT
CTGGCCGCGA TGCTGATGCA GACCTATTCC GATCAATTAT TGTTTGTTTT GATTGCTGCC
GTGTCCCTGG GATATCTGAT TATCCTGTTG AAAAAAGCGG ATCATCATCC CCGGCCGCTG
GCTGTGTGA
 
Protein sequence
MSTYTRPVLL LLCGLLLLTV CLAVLNTLVP LWLNDRQLPV WQVGVVGSAY FSGNLVGTLA 
AGGLIRRYGF NRSYYLAVLL FGLATAALAL SSDIGSWILW RFVAGIACAL IWVVVESALL
CSGNALNRGQ LLAAYMMAYY LGSVMGQLLL GIVPTALLSI LPWLVALVLL AALPLLFARI
PPPQPVTQRV NVWRMLRYRS ARLGIQGCVI SGVILGSLYG LMPLYLAHQG MSDASVGYWM
ALLISAGILG QWPVGRLADR YGRLLVLRVL VFAVILGSLA MWLPGRYSMA PSLFLLGAAG
FTLYPVAMSW ACEKVAPNEL VAMNQALLLS YTIGSLCGPS LAAMLMQTYS DQLLFVLIAA
VSLGYLIILL KKADHHPRPL AV