Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2341 |
Symbol | |
ID | 8118946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 2677325 |
End bp | 2678614 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644852726 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_003004662 |
Protein GI | 251789941 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00666928 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGAAT CCCTGACCCT ACAACCGATC TCATTAATTA ACGGTACGAT CAATCTGCCT GGTTCCAAAA GCGTTTCGAA TCGCGCTTTG TTATTGGCTG CGTTGGCTAA AGGCACTACG CACCTGACTA ATTTGCTGGA TAGCGATGAT ATTCGCCACA TGCTCAATGC GCTGAGTGCG TTAGGTGTGG AGTATCGCCT GTCTGCTAAT CGTACCGAGT GCGAAATTGT TGGTTTAGGT ACTCCATTAA CCGCATCTGC TCCGCTGGAG CTGTTTCTGG GGAATGCCGG AACGGCCATG CGCCCGTTGG CCGCGGCGTT ATGCCTGACA GAGGGCGATA TCGTATTGAC CGGTGAGCCG CGCATGAAAG AACGCCCGAT CGGCCATCTG GTGGATGCAT TGCGTCAGGG AGGCGCTCGT ATCGACTATT TGGAACAGGA AAACTACCCG CCGCTGCGCT TGTCAGGTGG TTTTCAGGGT GGAGAGATCA GTGTCGACGG CTCGGTATCA AGTCAGTTCC TTACCGCATT GTTAATGGCG GCGCCGTTGG CGGTGCAGGA TACGCGTATC AGCATCAAGG GCGAGCTGGT TTCCAAGCCC TACATCGATA TTACCCTGCA TATGATGGAA ACCTTCGGCA TCACGGTGCT CAATGATGAT TACCAGACCT TTGTGGTTGC AGGTAATCAG CAGTACCAGT CACCAGGGCA TTACTTGGTG GAAGGCGATG CGTCGTCCGC CTCCTACTTT TTGGCGGCCG CCGCTATCCG GGGAGGGACG GTACGTGTGA CCGGCGTCGG TCGTAACAGC GTACAAGGCG ATATCCTTTT TGCCGATGTA TTGGAGAAAA TGGGAGCCCG GATTGGCTGG GGCGACGACT ATATTGAATG TCAGCGCGGG GAACTTCACG CGATTGATAT GGATATGAAC CATATCCCTG ATGCGGCGAT GACCATCGCT ACGGCGGCGT TATTTGCCGA AGGCGGAACG ACGACGCTGC GCAATATCTA CAACTGGCGT GTAAAAGAAA CCGATCGTTT GGCTGCTATG GCGACGGAAC TGCGTAAGGT TGGAGCTGAA GTAGAAGAAG GGCATGACTA CATCCGCATT ACGCCGCCGA CACAACTGAA AGCGGCTGAA ATCGGAACGT ATAATGATCA CCGCATGGCG ATGTGCTTCT CCCTGGTGGC GCTGTCTGAT ACGCCGGTTA CAATCCTCGA CCCCAAATGT ACCGCCAAAA CATTTCCGGA TTATTTCCAG CAACTGGAGC GCCTGAGTCA GCATAATTAG
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Protein sequence | MQESLTLQPI SLINGTINLP GSKSVSNRAL LLAALAKGTT HLTNLLDSDD IRHMLNALSA LGVEYRLSAN RTECEIVGLG TPLTASAPLE LFLGNAGTAM RPLAAALCLT EGDIVLTGEP RMKERPIGHL VDALRQGGAR IDYLEQENYP PLRLSGGFQG GEISVDGSVS SQFLTALLMA APLAVQDTRI SIKGELVSKP YIDITLHMME TFGITVLNDD YQTFVVAGNQ QYQSPGHYLV EGDASSASYF LAAAAIRGGT VRVTGVGRNS VQGDILFADV LEKMGARIGW GDDYIECQRG ELHAIDMDMN HIPDAAMTIA TAALFAEGGT TTLRNIYNWR VKETDRLAAM ATELRKVGAE VEEGHDYIRI TPPTQLKAAE IGTYNDHRMA MCFSLVALSD TPVTILDPKC TAKTFPDYFQ QLERLSQHN
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