Gene Dd1591_2341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2341 
Symbol 
ID8118946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2677325 
End bp2678614 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content54% 
IMG OID644852726 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_003004662 
Protein GI251789941 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00666928 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGAAT CCCTGACCCT ACAACCGATC TCATTAATTA ACGGTACGAT CAATCTGCCT 
GGTTCCAAAA GCGTTTCGAA TCGCGCTTTG TTATTGGCTG CGTTGGCTAA AGGCACTACG
CACCTGACTA ATTTGCTGGA TAGCGATGAT ATTCGCCACA TGCTCAATGC GCTGAGTGCG
TTAGGTGTGG AGTATCGCCT GTCTGCTAAT CGTACCGAGT GCGAAATTGT TGGTTTAGGT
ACTCCATTAA CCGCATCTGC TCCGCTGGAG CTGTTTCTGG GGAATGCCGG AACGGCCATG
CGCCCGTTGG CCGCGGCGTT ATGCCTGACA GAGGGCGATA TCGTATTGAC CGGTGAGCCG
CGCATGAAAG AACGCCCGAT CGGCCATCTG GTGGATGCAT TGCGTCAGGG AGGCGCTCGT
ATCGACTATT TGGAACAGGA AAACTACCCG CCGCTGCGCT TGTCAGGTGG TTTTCAGGGT
GGAGAGATCA GTGTCGACGG CTCGGTATCA AGTCAGTTCC TTACCGCATT GTTAATGGCG
GCGCCGTTGG CGGTGCAGGA TACGCGTATC AGCATCAAGG GCGAGCTGGT TTCCAAGCCC
TACATCGATA TTACCCTGCA TATGATGGAA ACCTTCGGCA TCACGGTGCT CAATGATGAT
TACCAGACCT TTGTGGTTGC AGGTAATCAG CAGTACCAGT CACCAGGGCA TTACTTGGTG
GAAGGCGATG CGTCGTCCGC CTCCTACTTT TTGGCGGCCG CCGCTATCCG GGGAGGGACG
GTACGTGTGA CCGGCGTCGG TCGTAACAGC GTACAAGGCG ATATCCTTTT TGCCGATGTA
TTGGAGAAAA TGGGAGCCCG GATTGGCTGG GGCGACGACT ATATTGAATG TCAGCGCGGG
GAACTTCACG CGATTGATAT GGATATGAAC CATATCCCTG ATGCGGCGAT GACCATCGCT
ACGGCGGCGT TATTTGCCGA AGGCGGAACG ACGACGCTGC GCAATATCTA CAACTGGCGT
GTAAAAGAAA CCGATCGTTT GGCTGCTATG GCGACGGAAC TGCGTAAGGT TGGAGCTGAA
GTAGAAGAAG GGCATGACTA CATCCGCATT ACGCCGCCGA CACAACTGAA AGCGGCTGAA
ATCGGAACGT ATAATGATCA CCGCATGGCG ATGTGCTTCT CCCTGGTGGC GCTGTCTGAT
ACGCCGGTTA CAATCCTCGA CCCCAAATGT ACCGCCAAAA CATTTCCGGA TTATTTCCAG
CAACTGGAGC GCCTGAGTCA GCATAATTAG
 
Protein sequence
MQESLTLQPI SLINGTINLP GSKSVSNRAL LLAALAKGTT HLTNLLDSDD IRHMLNALSA 
LGVEYRLSAN RTECEIVGLG TPLTASAPLE LFLGNAGTAM RPLAAALCLT EGDIVLTGEP
RMKERPIGHL VDALRQGGAR IDYLEQENYP PLRLSGGFQG GEISVDGSVS SQFLTALLMA
APLAVQDTRI SIKGELVSKP YIDITLHMME TFGITVLNDD YQTFVVAGNQ QYQSPGHYLV
EGDASSASYF LAAAAIRGGT VRVTGVGRNS VQGDILFADV LEKMGARIGW GDDYIECQRG
ELHAIDMDMN HIPDAAMTIA TAALFAEGGT TTLRNIYNWR VKETDRLAAM ATELRKVGAE
VEEGHDYIRI TPPTQLKAAE IGTYNDHRMA MCFSLVALSD TPVTILDPKC TAKTFPDYFQ
QLERLSQHN