| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2316 |
|---|
| Symbol | |
|---|
| ID | 8118921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2650842 |
|---|
| End bp | 2651594 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644852701 |
|---|
| Product | YcgR family protein |
|---|
| Protein accession | YP_003004637 |
|---|
| Protein GI | 251789916 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5581] Predicted glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTAG TGGATGACAA TATGAAAGAG CAGTACGCCA GGCGTAACAA AATGGCGATT
TGCGCCACCT TGCGCGGACT GCAAAGACAA GACGCCGCAG TAATGGTGTA TCACACACAC
GGTCAGTTCA TCAGTAAGAT CCTTGAGGTT GATTCGGACG AGGGAGAGTT CCTGTTTGAC
CTTGGGGCAC TGGAGCGTGA GAACAGTCGT GCGTTGTTTG CCGGCGAGCT TGCGTTTGCG
GCGGAAACGG CTGGTGCGAA GGTTGAATTC CGGTCCACGA TTATCCGCAT GGTCGAACAT
GACGATTTAC CGGCATTTTG TGCGGCTGTA CCCGACGTAC TTTACTATAT TCAGCGTCGT
AATTTTTTCC GTATTAACTC TCCAGCCTGG CCCCCGATGA TCTGCCGGGG CGAGTTGCCT
GATAACAGCT ACTTTGAATT TAACCTGAAG GATTTATCGC TGGGCGGCTT GTGCATGTAT
ACCGACGATC AATCCAGGGT TGGTCTTTTT GAGCCGGGAA TGACGCTGAA AAACGTCGAT
GTTGATCTTG CCAGCTACGG GCAGTTCTGC CTGGATTTAG AGTTCGTTAC TCATGCCACC
ACAAAAGTCG TGGACAGCAA AGGCCGGGTA AAACAGATCG AACGCTTGAG CTTTAAATTT
CCGCAATTGA ATGCTGCGCA GGAGCGTGGG CTACAGCAGG TGATTACCGA ACTGGAATTA
GACCAGAACG AGAAGCGCAA ACGCCTGCGT TGA
|
|---|
| Protein sequence | MDVVDDNMKE QYARRNKMAI CATLRGLQRQ DAAVMVYHTH GQFISKILEV DSDEGEFLFD
LGALERENSR ALFAGELAFA AETAGAKVEF RSTIIRMVEH DDLPAFCAAV PDVLYYIQRR
NFFRINSPAW PPMICRGELP DNSYFEFNLK DLSLGGLCMY TDDQSRVGLF EPGMTLKNVD
VDLASYGQFC LDLEFVTHAT TKVVDSKGRV KQIERLSFKF PQLNAAQERG LQQVITELEL
DQNEKRKRLR
|
|---|
| |