Gene Dd1591_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2306 
Symbol 
ID8118911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2639881 
End bp2640633 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content56% 
IMG OID644852691 
Product3-deoxy-D-manno-octulosonate cytidylyltransferase 
Protein accessionYP_003004627 
Protein GI251789906 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.865231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTTA CTGCAATTAT TCCTGCTCGC TATGCTTCGA CCCGGTTACC GGGTAAGCCG 
CTGGCGGATA TTCACGGCAA ACCGATGGTG ATACACGTGA TGGAACGCGC CCGCGAATCC
GGCGCCGGTC GCGTAGTCGT GGCGACCGAT AACGCCGATG TCGCACGTGC CGTCGAGCAG
GCGGGGGGCG AAGTCTGTTT GACCAGCCCA AACCATAATT CCGGTACCGA GCGTCTGGCA
GAAGTCATCG ATCGTTACGG TTTTACCGAT GATGAAATCA TCGTCAACGT ACAAGGCGAT
GAGCCGTTGA TCCCGCCGGT GATCATTCGC CAGGTGGCGG AGAATCTGGC TGGCAGCCGT
GCCGGTATGG CGACGCTGGC AGTACCGATC ACGACATGTG AGGAAGTGTT TAACCCGAAT
GCAGTGAAAG TGGTAACGGA CGCCGAAGGT TATGCGCTTT ATTTCTCTCG TGCGACTATT
CCGTGGGAGC GTGACCGTTT CGCCGAATCC CGAGACAGCA TTGGCGACCA TTTCCTGCGG
CATATCGGTA TTTATGCCTA TCGTGCCGGA TTTATTCGGC GCTATGTCGG TTGGGCGCCC
AGCCAATTGG AGAAAATCGA GATGCTGGAG CAACTGCGTG TGCTTTGGTA TGGCGAGAAA
ATTCATGTGG CGGTAGCTAA AGAAGTCCCC AGTGTCGGGG TGGATACGCC AGAAGATCTG
GCTCGCGTCA GGGCAGCGAT GACAGCAAAC TGA
 
Protein sequence
MTFTAIIPAR YASTRLPGKP LADIHGKPMV IHVMERARES GAGRVVVATD NADVARAVEQ 
AGGEVCLTSP NHNSGTERLA EVIDRYGFTD DEIIVNVQGD EPLIPPVIIR QVAENLAGSR
AGMATLAVPI TTCEEVFNPN AVKVVTDAEG YALYFSRATI PWERDRFAES RDSIGDHFLR
HIGIYAYRAG FIRRYVGWAP SQLEKIEMLE QLRVLWYGEK IHVAVAKEVP SVGVDTPEDL
ARVRAAMTAN