| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2167 |
|---|
| Symbol | |
|---|
| ID | 8118210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 2494456 |
|---|
| End bp | 2495217 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644852551 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_003004489 |
|---|
| Protein GI | 251789768 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.18591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCATTACC AACCTAAACA AGACCTGTTA CAACACCGCA TTATTCTGGT TACGGGCGCC
GGTGACGGTA TTGGCCGCGA AGCCGCCCTG ACCTACGCGC GCTACGGCGC ACGATTGGTG
TTGCTGGGGC GTACCGAAAG TAAATTGCAG GATGTGGAGC AACAGATTCT GCAGGAATGC
GGTAACCACA GTTATCTGAT TCCCTGCGAC ATGCTAACCG CCAGTCATCA TGACTTCATA
CAGATCGCCG GCCAGATCGG CCAGGCACTG CCACGCTTGG ACGGCGTACT GCACAATGCC
GGACTGCTGG GCGACGTCGT ACCGATGGCG GAGCAATCTG CCACCACCTG GCATCAGGTC
ATGCAGGTTA ACGTTAATGC CACCTTTATG CTGACGCAGG CGCTATTGCC GTTATTGCTG
AAATCGACCA GCCCGTCGCT GATTTTCACC AGTTCCAGCG TTGGCCGACA GGGGCGCGCC
AACTGGGGGG CTTACTCCGT ATCCAAGTTT GCCACCGAAG GTATGATGCA GGTTCTGGCT
GAGGAATACC GTAACCGTAA CCTGCGGGTC AACTGCATCA ATCCCGGCGG AACGCGAACC
TCAATGCGTG CGGCGGCCTT CCCCGACGAA GACCCGAATA AACTTAAAAC CCCGGCGGAT
ATCATGCCGC TTTACCTGTA CCTGATGGGA GACGACAGCC GTCGCAAAAC CGGCATGAGC
TTTGATGCCC AACCAGGACG GAAACCCGGC CCGGCCGAAT GA
|
|---|
| Protein sequence | MHYQPKQDLL QHRIILVTGA GDGIGREAAL TYARYGARLV LLGRTESKLQ DVEQQILQEC
GNHSYLIPCD MLTASHHDFI QIAGQIGQAL PRLDGVLHNA GLLGDVVPMA EQSATTWHQV
MQVNVNATFM LTQALLPLLL KSTSPSLIFT SSSVGRQGRA NWGAYSVSKF ATEGMMQVLA
EEYRNRNLRV NCINPGGTRT SMRAAAFPDE DPNKLKTPAD IMPLYLYLMG DDSRRKTGMS
FDAQPGRKPG PAE
|
|---|
| |