| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2157 |
|---|
| Symbol | |
|---|
| ID | 8118200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 2483103 |
|---|
| End bp | 2484155 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644852541 |
|---|
| Product | electron transport complex, RnfABCDGE type, D subunit |
|---|
| Protein accession | YP_003004479 |
|---|
| Protein GI | 251789758 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
|---|
| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.853366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTCA GAATCGCACC CTCACCCTTT ACCCATAACC GCCAGTCCAC CCGCGCGATT
ATGCGTTGGG TCTTGATCGC CTGTGTGCCG GGTATCGCGG CGCAAGCCTG GTTTTTCGGT
TACGGCAACC TGATTCAACT GGCACTGGCC GGCGTTACCG CGCTCTTTAC TGAAGCGGCG
ATATTGCTAT TGCGAAAACG CCCGGTCATC GACACGCTAC AGGACAGCTC CGCATTATTG
ACGGCGGTAC TATTGGCCGT CAGCTTGCCG CCGTTTACGC CCTGGTGGAT GGTCGTACTG
GGCACCACCT TCGCGATTAT CATCGCTAAG CAGCTGTATG GTGGGCTGGG TCAAAACCCG
TTCAACCCGG CCATGATCGG CTATGTGGTG TTGCTGATAT CCTTTCCGGT ACAGATGACC
AGTTGGTTGC CGCCGGACGG GCTACAAGCC GCTCCGGTCG GGTTCGACGA TGCGCTGGCG
GCAATATTCA CCGGGCACGG AACGGCAGGT CAGCCTATCC AGCAACTGAT TCAGGGGGTG
GATGGCGTCA GTCAGGCCAC ACCGCTGGAT GCCTTCAAAA CCGGGTTACG CAGCGGCCAT
CAACCCGATA TGTTGCTGCA TCAGCCGTTA TTGGGCGGTG TGTTGGGCGG GCTGGGCTGG
CAATGGATTA ATCTGGCCTT TCTGGTCGGC GGCCTGTTTA TGCTATTACT GCGGATAATC
CACTGGCAGA TTCCGTTTGG CTTTCTGCTC GCCTTATCCT TGTGCGCACT GGTGGGCTGG
CATCTGCACC CGGATGTTAG CGCCCCACCG TTGCTGCATC TGTTTTCCGG CGCCACCATG
CTGGGTGCAT TCTTCATTGC CACCGACCCG GTAACGGCCT CCACGACCCC CAGAGGCCGA
CTGATTTTCG GTGCGTTAAT CGGCATACTG GTATGGACGA TTCGGACCTA CGGTGGTTAT
CCCGATGGCG TCGCCTTTGC TGTGTTGCTG GTCAACATTA CCGTGCCGTT GATTGATTAC
TTCACTAAAC CGCGCGCTTA TGGCCATCGC TAA
|
|---|
| Protein sequence | MAFRIAPSPF THNRQSTRAI MRWVLIACVP GIAAQAWFFG YGNLIQLALA GVTALFTEAA
ILLLRKRPVI DTLQDSSALL TAVLLAVSLP PFTPWWMVVL GTTFAIIIAK QLYGGLGQNP
FNPAMIGYVV LLISFPVQMT SWLPPDGLQA APVGFDDALA AIFTGHGTAG QPIQQLIQGV
DGVSQATPLD AFKTGLRSGH QPDMLLHQPL LGGVLGGLGW QWINLAFLVG GLFMLLLRII
HWQIPFGFLL ALSLCALVGW HLHPDVSAPP LLHLFSGATM LGAFFIATDP VTASTTPRGR
LIFGALIGIL VWTIRTYGGY PDGVAFAVLL VNITVPLIDY FTKPRAYGHR
|
|---|
| |