| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2139 |
|---|
| Symbol | |
|---|
| ID | 8118182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 2460799 |
|---|
| End bp | 2462352 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644852523 |
|---|
| Product | protein of unknown function DUF945 |
|---|
| Protein accession | YP_003004461 |
|---|
| Protein GI | 251789740 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5339] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.434013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAAAA AAACAGTTGT AGCCGCCGGC GTCGTTATTG CGCTCGCCGC AGCCTGGGGG
GGAGCCTCCT GGTTTACCGG TAAGCAAATT GAACAGCATA TGGGCGAAGT CACCAATAAT
TTGAATGGCG AATTGAAAAA TGCCTACCCT CAGGCTGGCG TCAAGGTGGC ATTCCGCGAT
TATCAGCGTG GCCTGTTCAA AAGCCAGGTC GCACTGGTTT TACAGTCAGA CGGCAGCAAT
GCCAACGAAC ATCTGTTGGG TGCCAATGAG GAAGTGGTAT TCAACACAAC CGTATTCCAC
GGCCCTTTCC CGCTCACCGG TAATCAGTTC AGCCTGAAAC CGGCCATGGC CGCCGTACAC
GGTGAGTTAG CCAACACGGA ATCCGTAAAA GCGCTGTTTG AACTCACCAA AAACAAGCCG
TTTATCACGG CGAATAGCCG TATCGATTAT AACGGCGATA CCCACTCCGC CGTGATGCTG
GAAGCCCTGG ACGTGACGGA CCAAGGCATG AAAGTCAATT TCAGCGGTAC AACGCTGTTG
GTCGATCTGG CAGGCGATCT ACGCGCCGGT AAAATCGCCG GCAATGTCGC CAGTCTGACG
ATGGAGAAAA CGAATCTGCA AGGGCAGAAC GAAAAACTGA CGTTGCAGGA CCTGGCGCTT
AACAGCGATA CCCGTAAAGG CAAATTCGAT CTCGAAGTCG GCGACGCCAA GCTGACGCTG
AAAAAACTGG CGTTGAATGT GCAAAGCGGC GATAGCCTGG TATTAAATGA CTTTTCGTTG
ACCAATCACA CCACGGAAGA TGACGCAAAC CTGGCCGGAC AGCTGGCGCT GTCACTGGGG
TCGGCATTAT TCCGCGACCA AAATCTGGGC TCGTGGAACC TGAATTTCAA CTTCTCTGGA
TTGGACGGCA AAGGCACTCG CCAGTTTATG ACCGAATACC AGAAGAACCT GCAATCGATG
CTGCAAAACA TCGATCATGT TCCCCCTGAG GTCTACAACC AGCAACTGGC GGCCTTAGTG
CTGCATAATC TGCCGCAGTT GCTGAAAGGC AATCCTAGCA TCAAGATCGC GCCATTCAGT
TGGAAAAACG CTAAAGGTGA AAGTACCTTC ACGCTGGCGC TGGATTTAAC CGATCCGCTG
CAGAAGAGCG CCGCACCGAG CGGACAACTT TCCGACGAAG AAGCCATTAT TCGCCAATCG
GTCAAAAACC TCGAAGCCCG GCTCAATGTG CCGCTGGACA TGGTGACCGA GCTGATGGTG
CAGACTGCCG CCAAACCCGG TTCCGATGCA GAGAAAAAAC AACTCGAGCA GATGGCGCGC
CAGCAGGCGC AATTGATGGC GAATATCGGT CAGATGAGCC AGCTAACCGT CACCAAAGAC
AACACGATCA CCAGCTCACT GCAATACACC GACGGGTCGG TAACCTTTAA CGGACGCAAG
ACGCCGTTGG CGGAGTTTAT CGCTCCGTTT ATTACTCAAC CGGCGGAAAA CGTGCCTGAA
CAAGGCGATG ACGCCCCAGA AGCGCCGCAA CCGGACGCCT CCGTCAGTCC GTAA
|
|---|
| Protein sequence | MAKKTVVAAG VVIALAAAWG GASWFTGKQI EQHMGEVTNN LNGELKNAYP QAGVKVAFRD
YQRGLFKSQV ALVLQSDGSN ANEHLLGANE EVVFNTTVFH GPFPLTGNQF SLKPAMAAVH
GELANTESVK ALFELTKNKP FITANSRIDY NGDTHSAVML EALDVTDQGM KVNFSGTTLL
VDLAGDLRAG KIAGNVASLT MEKTNLQGQN EKLTLQDLAL NSDTRKGKFD LEVGDAKLTL
KKLALNVQSG DSLVLNDFSL TNHTTEDDAN LAGQLALSLG SALFRDQNLG SWNLNFNFSG
LDGKGTRQFM TEYQKNLQSM LQNIDHVPPE VYNQQLAALV LHNLPQLLKG NPSIKIAPFS
WKNAKGESTF TLALDLTDPL QKSAAPSGQL SDEEAIIRQS VKNLEARLNV PLDMVTELMV
QTAAKPGSDA EKKQLEQMAR QQAQLMANIG QMSQLTVTKD NTITSSLQYT DGSVTFNGRK
TPLAEFIAPF ITQPAENVPE QGDDAPEAPQ PDASVSP
|
|---|
| |