| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2135 |
|---|
| Symbol | |
|---|
| ID | 8118178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 2455470 |
|---|
| End bp | 2456747 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644852519 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003004457 |
|---|
| Protein GI | 251789736 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTACCC CGCTGTCTGC ACAGGGAATA CCTGTTTCCG TCACTGACGA CATCCAACCT
CAACGCAACA ACCACTCTCC TGGTTACAAA AACCCGTTTA TCACCCGAGG GACGCCGACA
TTCATTCGCG TCACGCTGGC GCTGTTTTCC GCCGGTCTGG CGACTTTCGC CCTGTTGTAC
TGCGTACAAC CGATATTGCC GGTGTTGTCG CAAGCATTCG GCGTATCGCC GGCGGCCAGC
AGCTTGTCGC TTTCCGTCTC GACCATCACC ATGGCTGTTG GGCTGTTGTT TACCGGCCCG
TTGTCCGATA CGGTGGGCCG CAAAAACGTC ATGGTAGTGT CGTTATTGTT GGCGTCGGTC
TGTACTTTGA TTGGTTGCAC CATGACGCAA TGGGCCGGGC TGCTGGCAAT GCGGGCGCTG
GTGGGCTTAT CGCTTAGCGG CGTGGCAGCC GTAGCGATGA CTTACCTGAG CGAAGAAATT
CATCCCAGCG TGGCCGCTTT CTCTATGGGG CTGTATATCA GCGGCAATTC CATTGGCGGC
ATGAGTGGAC GTTTATTAAC CGGGGTGATT ACCGATTTCT TCAACTGGCG CGTCTCTATT
GCCGCGATTG GCATTGTCGC GCTACTGGCG TCGTTGACGT TCTGGCGGAT CCTGCCGGAT
TCTCGCCACT TTCGCGCAGG TTCGCTGCGC CCGAAAACCC TGTGGATCAA CACCCGTTTG
CAATGGCGCG ACGCCGGCTT ACCGCTCTTA TTCGCCGAAG GTTTCCTATT GATGGGAAGC
TTTGTCACGC TATTTAACTA TATAGGCTAT CGGTTGTTGG CCTCGCCTTA TAACCTGAGC
CAGACGATCG TGGGGTTATT GTCGGTGGTC TATCTGACCG GCAGTTACAC GTCACCACGT
GCCGGGGCAA TGATTACCCG GTTTGGCCGA GGCCCGGTGC TGGTCGGTAG TATTCTCCTG
ATGCTGTCCG GCCTGTGGCT AACCCTGTTC AGTGCATTAC TGGCGATGTT TGCCGGGATG
ATGTTGTTTG CTGCCGGGTT CTTTGCCGCC CATTCGGTGG CCAGCAGTTG GATTGGCGTG
CGGGCGCTGC GCGCCAGAGG ACAGGCCTCG TCACAGTATT TGTTCTGTTA TTATCTGGGT
TCTAGCCTGG CCGGCACCTC GGGGGGATTC TTCTGGTATC ACTATGGCTG GAGCGGTCTG
GTGTTGTTTC TTTCATGCCT GCTGATGCTG GCATTGTTGA TTGGGTGTAA ACTGAAGTCA
CTGAAAGAGA GGCACTAA
|
|---|
| Protein sequence | MSTPLSAQGI PVSVTDDIQP QRNNHSPGYK NPFITRGTPT FIRVTLALFS AGLATFALLY
CVQPILPVLS QAFGVSPAAS SLSLSVSTIT MAVGLLFTGP LSDTVGRKNV MVVSLLLASV
CTLIGCTMTQ WAGLLAMRAL VGLSLSGVAA VAMTYLSEEI HPSVAAFSMG LYISGNSIGG
MSGRLLTGVI TDFFNWRVSI AAIGIVALLA SLTFWRILPD SRHFRAGSLR PKTLWINTRL
QWRDAGLPLL FAEGFLLMGS FVTLFNYIGY RLLASPYNLS QTIVGLLSVV YLTGSYTSPR
AGAMITRFGR GPVLVGSILL MLSGLWLTLF SALLAMFAGM MLFAAGFFAA HSVASSWIGV
RALRARGQAS SQYLFCYYLG SSLAGTSGGF FWYHYGWSGL VLFLSCLLML ALLIGCKLKS
LKERH
|
|---|
| |