| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2115 |
|---|
| Symbol | |
|---|
| ID | 8118158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2436846 |
|---|
| End bp | 2437541 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644852500 |
|---|
| Product | Rare lipoprotein A |
|---|
| Protein accession | YP_003004438 |
|---|
| Protein GI | 251789717 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4305] Endoglucanase C-terminal domain/subunit and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.27237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAGC TCAAAAGTGT TTTATTAGCA TCCTCAGTGT TATTCCTCCC TCTGACTCAA
CAAGCCCAGG CCGCCTGGGA ACTCGGTGAT ATCTGTTATG GATATGCGAC AGCTACCGGA
TCAGGCTATT CCGGCGGTGC TTTATTATTA GATCCGATTC CTTCCAATAT GGAGATTACC
GCATTAAACA GGGCGCAACT GGATTATAAA GGCGTTAAGG CGGCACTCGC CGGTGCTTAT
CTAAAAGTTA CCGGCCCTAA GGGAAGCACT ATCGTGTATG TTACGGATTT GTACCCTGAA
GGCGGTGATT GTGCACTGGA TTTATCATTC AATGCTTTCG AAAAAATTGG TAACTTGCAG
GATGGGAAAA TCAATATCCA ATGGGAATTG GTAAAAGCAC CGGTGAGTGG TAATGTTGTA
TACCGGGTTA AAGAAGGCTC CAATCCTTAT TGGGCGGCGG TACAATTCCG TAATGTTAAA
TACCCGATTA TTGAAATGAA GTATTTAAGA GGTACGCAAT GGGTTAGCGC ACCGAAAACG
GATTACAATC ATTTCATTCT GGAGTTTGTG GGTAAAAATG ATATTCCAAT CGAATTCACC
GATATTAAAG GCAATATATT AAGCGATACG TTACCGCCGA TGTCGGACAG TACGTCGTCA
GCCTATCTGA TCACCGGTAA AGTCCAACTG CCCTAA
|
|---|
| Protein sequence | MMKLKSVLLA SSVLFLPLTQ QAQAAWELGD ICYGYATATG SGYSGGALLL DPIPSNMEIT
ALNRAQLDYK GVKAALAGAY LKVTGPKGST IVYVTDLYPE GGDCALDLSF NAFEKIGNLQ
DGKINIQWEL VKAPVSGNVV YRVKEGSNPY WAAVQFRNVK YPIIEMKYLR GTQWVSAPKT
DYNHFILEFV GKNDIPIEFT DIKGNILSDT LPPMSDSTSS AYLITGKVQL P
|
|---|
| |