Gene Dd1591_2110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2110 
Symbol 
ID8118153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2429447 
End bp2430889 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content53% 
IMG OID644852495 
ProductSerralysin 
Protein accessionYP_003004433 
Protein GI251789712 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2931] RTX toxins and related Ca2+-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.67403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAAA ACGAGAATGT ATCGTTAAAT ACCTCTGCTG CCGCCAAGGC CGGTAGTTAT 
ACCGGCTATG CAGATGTGTA TGACTTTTGG TATTACCATC AGCGCGGTGA CGGTGTCACG
GTTAATGGTA AGCCGTCTTA TTCTACCGAC AAAGCGGTGG AAGAAGGGTT AACCCGGCCG
CATACCACCT GGAATGGCGA CAATGTATAC GGCAAAGCGG CGAATTTGAC CTATTCGTTT
CTAAATACCT TTAGTTCAAC GCCTAATGGC CATACCGGAC CGGTCAAGTT TACTCCGGTC
CAGATGCAAC AGGTAAAACT GTCTTTGCAG TCTTGGTCTG ATGTGGCGAA CCTGACGTTT
ACTGAAGTCA GCCCTAACCA AAAAGCCAAT CTGACCTTCG CTAACTACAC CCGCAACGCG
GATGGCAGCA TCGAAAACGA TACTCAGGCC TATGCCGCTT ACCCGGGGCA ACATCCGTTG
TCTGGTAGTG CCTGGTTCAA CTACAACCAG CCGAGTATTC GCAACCCGGA TACCGATGAA
TATGGCCGCC ATACCTTTAC CCATGAAATC GGCCATACGT TGGGGCTGAG TCATCCTGCC
GAATACAATG CCGGCGAAGG CGATATCAGC TACAAAAACA GTGCGGCGTA TGCGGAAGAT
TCCCGTCAGT TTAGCATCAT GAGTTATTGG GATGTCGAAA ACACCGGCGG CGACTTCAAA
GGCCATTACT CGGCTGGCCC GTTAATGGAC GACATCGCGG CTATCCAGAA GTTGTACGGC
GCCAATATGA CGACCCGTAC CGGTGATTCA GTCTACGGTT TCCATTCCAA TACCGACCGT
GATTTCTACA CCGCGAATAA CAGCAGCAAA GCGCTGATTT TCTCGGTATG GGATGCGGGC
GGTAACGATA CCTTTGACTT TTCGGGTTAC AGCAATAACC AGCGCATCAA CCTGAACGAA
GGCTCTCTCT CGGATGTCGG TGGCCTGAAA GGTAACGTTT CCATCGCACA CGGCGTGACC
ATCGAGAATG CGATCGGCGG TTCCGGCAAC GACCTTCTGG TAGGGAACGG TGCTAACAAC
GTGCTGCAGG GCGGCGCGGG CGATGATGTG TTATACGGCA GCACCGGTGC TGATACGTTG
GTCGGCGGAG CCGGACGCGA CATTTTTGTG TATGGCAGCG GTCAGGATTC CACCACATCG
GCGTACGACT GGATTAATGA TTTCCAGAGC GGCGTGGATA AAATCGACCT GTCGGCGTTC
CGTAATGGAG GCCAGTTGAG CTTTGTACAG GATCAGTTTA CCGGCAAAGG GCAGGAAGTG
ATGTTGCAGT GGGATGCGGC TAGCAGTGTC ACCAACCTGT GGCTCCATGA AGCGGGCCAC
AGCTCGGTGG ATTTCCTGGT GCGTATTGTC GGCCAGGCAA CACAGTCCGA TATTATTGCA
TAG
 
Protein sequence
MQQNENVSLN TSAAAKAGSY TGYADVYDFW YYHQRGDGVT VNGKPSYSTD KAVEEGLTRP 
HTTWNGDNVY GKAANLTYSF LNTFSSTPNG HTGPVKFTPV QMQQVKLSLQ SWSDVANLTF
TEVSPNQKAN LTFANYTRNA DGSIENDTQA YAAYPGQHPL SGSAWFNYNQ PSIRNPDTDE
YGRHTFTHEI GHTLGLSHPA EYNAGEGDIS YKNSAAYAED SRQFSIMSYW DVENTGGDFK
GHYSAGPLMD DIAAIQKLYG ANMTTRTGDS VYGFHSNTDR DFYTANNSSK ALIFSVWDAG
GNDTFDFSGY SNNQRINLNE GSLSDVGGLK GNVSIAHGVT IENAIGGSGN DLLVGNGANN
VLQGGAGDDV LYGSTGADTL VGGAGRDIFV YGSGQDSTTS AYDWINDFQS GVDKIDLSAF
RNGGQLSFVQ DQFTGKGQEV MLQWDAASSV TNLWLHEAGH SSVDFLVRIV GQATQSDIIA