| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2109 |
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| Symbol | |
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| ID | 8118152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 2427879 |
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| End bp | 2429279 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644852494 |
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| Product | type I secretion outer membrane protein, TolC family |
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| Protein accession | YP_003004432 |
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| Protein GI | 251789711 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAGGA AAGCGGTATT ACTGGCGAGA TTATTAGCGG TGGCGTTATC CCTGCCGGGC
GTCGGCGCTC AGGCGATGGG GCTACTGGAT GCATGGGAGC TGGCGCTGCG TAATGATGCG
CAACTCCGTG CGGCGGGCTT TGAGCGCGAT GCCGGGCAGG AAGAAGTGGC GATCGGTCGA
GCCGGGTTGT TGCCATCGTT GCAATATAGC TATGGCGCCA ATTACAGCCA CTCTAAGGTG
ACGCAGCGCG ACCGGACGAC GGATAACACC ACCCAGCGTG ATTACAACAA CTATGTCTCG
ACCCTTACGC TGCGTCAGCC GCTACTGGAT TATGCCGCCT GGGCGCGTTA CCAGCAGGGC
GTTACCCGGA AATTGATGGC CGATCAGCGG TTTCGCGAGC GCAGCCAGGA TTTGATGGTC
CGATTGTATC AGGCCTGGAG TGATGCGCTG TTGGCGCAGG AGAAACTGAT GCTGCTGGAT
GCGCAGCGAC GCGCCTATCA GGAACAGCTG GCGTTGAATC GTCGCCTGCT GGCGGCGGGT
GAAGGAACAC AGACCGACCT GCGTGAAACG GAAGCCCGCT ATACCGTGAT CGAAGCGCAA
CGTATCGAGC AGGAAGACAC GTTAGATGCT GCGATGACCG CGCTGGAAAA TATGATCGGC
TCGCCGCTAC AGATTCAGGA TCTGTCCCCG CTGGTGTTGG AGGAGTTGCC GGATAATGTC
ACGGAGAACC GCCCTTTGAC GCAGTGGCGC GAACTGGCGG TGCGGCATAA CGCTAAGCTG
GCCGTGCAAC GAGAGAATGT TGATTACAGC CGCTATGAAA TTGAGCGTAA TCGTGCCGGC
CATCTGCCTT CTATGGATCT GGTGGCGTCC ACCCGTAGTA GTTTGTCGGA GTCTGAGTAC
AACTATAACC AGAAATACGA TACCCAGACG GTCGGGGTGC AGGTTCGCGT GCCGTTGTAT
TCCGGCGGTG CGGTTTCCGC ATCGATGCGT CAGGCGACGG CAGAGTATGC CCAAAATCAG
GCGGAGTTGG ATAATCAGAC CCGGCAAACC TTTGCGGAAC TTCGCCGTCA GTTCAACTTG
TGTATCAATG GTGCGGCCAA GATCCGCGCC TGGCAGATGA GCGTTACCGC GGCGGCGGAA
GCCATCCGCG CTACCCGGCA GAGCGTTGCC GGTGGTGAGC GTATCAATCT GGATGTGTTG
ATGGCGGAGC AGGAGTGGTA CAACGCCCGA CGCGAACTGA CTGAAGTGAA ATATCGCTGG
CTTCAGGCGT GGTTAACTCT ACGTTATACC GCCGGCACGT TGAATGATCA GGATATGATG
CAATTGGCTG CCTGGTTTCA ACCGGCCGAC GCCGCGAATA AAAACAGGGC TAAAACGACA
TCCGGCAATA AAGTGAATTG A
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| Protein sequence | MRRKAVLLAR LLAVALSLPG VGAQAMGLLD AWELALRNDA QLRAAGFERD AGQEEVAIGR
AGLLPSLQYS YGANYSHSKV TQRDRTTDNT TQRDYNNYVS TLTLRQPLLD YAAWARYQQG
VTRKLMADQR FRERSQDLMV RLYQAWSDAL LAQEKLMLLD AQRRAYQEQL ALNRRLLAAG
EGTQTDLRET EARYTVIEAQ RIEQEDTLDA AMTALENMIG SPLQIQDLSP LVLEELPDNV
TENRPLTQWR ELAVRHNAKL AVQRENVDYS RYEIERNRAG HLPSMDLVAS TRSSLSESEY
NYNQKYDTQT VGVQVRVPLY SGGAVSASMR QATAEYAQNQ AELDNQTRQT FAELRRQFNL
CINGAAKIRA WQMSVTAAAE AIRATRQSVA GGERINLDVL MAEQEWYNAR RELTEVKYRW
LQAWLTLRYT AGTLNDQDMM QLAAWFQPAD AANKNRAKTT SGNKVN
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