Gene Dd1591_2083 details

Gene Information

• Locus tag: Dd1591_2083
• ID: 8119560
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: -
• Start bp: 2394386
• End bp: 2396329
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 644852470
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_003004408
• Protein GI: 251789687
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0223967
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATCTT TCCTGAGCCA TATCACAATC CCGGGTTTAA AAAGGAACCG CCCTGCTCGT 
GGGGCCTATC GCTGTGATGC ATTACCCTCC TCGCTGTCGG CACTCGGTTT ACCATCAAAA 
CCGGGCTTGC TGTTGGCATT TGTGCCGCCC GAAGCCAACT TTTCGGAGGT CAACCGCGCC 
TGGCAACGTT TCTCAGCGCC TAATCGAACC GTTATTACCC TGTCGTCCAC AGGGGCATTG 
TGCAGTCAAC GTAATCACTC CACGTACTGC GACATGAACA GCCCGTATGG CAGTTGGCTA 
TGGATGCCGC AGTCGCTGAT CGCCAAACAT GAAGTGCACA TGGTAGACCT GCACGTGCAT 
GACAAACACA GCGCCCGTGC CAGAATCGAG GGGATCAAGC GGGAACTGGA GCGTCTGAAT 
GTCAGTATGC CGCTCTCTTC GGATAACACC TTTGCGCTGA TTTATTGTGA CGGGCTGGCA 
GCGTCGGAAG GGTTCCTGAT GCAAGCCTGG TATGCCTGTC GCCGTTTCCC TTGTCTGACT 
ATCGGCGGCG CAGCAGGTGG ACGGCTCGAC TTTAGCGGAA CGTACATTGG TGCCGACAAT 
GCGGTACTGC AAGGAAAAGC GGTGATCGTG TTCTGCCAGA TGGCGCCCGG CAAGTCCTTC 
GCGCCATTCA AGAGCCAGAA CTTTGAACCG ACAAAACAAA GCTGGCTGGT CGCAGAGGCG 
GACCCGGTCG ACCGCACGGT GAAATCCGTT TTCGACGCCA GTGGCCATGA ACAACCTATT 
ATTGAGGCGA TCGCCTCATG CCTGCGTTGC CATCCGCATC AAATCGGTGA ACATCTGGCG 
GGAAAAACCT TTGCAGTTAA GGTCAATGAC GAGTACTTCG TTCGCTCGGT GGCTTCAATC 
AAAGAAGACC ACATTTCTTT TTTCTGCGAT CTGGAATTCG GCGACCGTCT GTACCTTATG 
CAATCAACAG ATTTTATCTC CACCACCGAG CGAGACTGGC AACAGTTCGT TTCGCAATAC 
GGTAAACCGG ATCTGGTTCT GCTTAACGAC TGCGTACTCC GCCGGGCTGG CAACACCGAA 
CTGGAACAGG CCCAATTCTT CGATCAGGTG CCTGCCGCAG GGTTTTCCAG TTTTGGTGAA 
ATTCTGGGGG TCCCTATCAA CCAGACGCTG TCGGCGTTGG CCTTTTTCGA CCACGATGTG 
AAAGCCATGA CGCACTTTCC GGTCGAATAC GCGGCCTATG CCGGCCACTA TGCCCAGCGT 
GCCTTACGGC GTTGGGAAGC GCTGCATGAT ATCCAGTCCA CCGTGGTCAA ACAGGTGGTT 
GATTATGAAC AGGCGCTGGC GCCCTTGCTG ACGGCCATGC CCCAACTGGA ACAGGCGACG 
CTACGGCAAA GCGATACGCT CGATATCGCC CAAACGAGTA TCCGCGCGAT CAGTGAATCC 
GCTTCAAAAA CCCAAGAAGC GCAAGTCCGC CTTGAAACCG GCCTCAACGA TCTGGAACGC 
ATTTCAAAAG GCATCAGCCA GATTACCAGC GGCATCAACG CCATTGCCGA TAAAACCAAT 
CTGTTGGCAT TGAACGCGGC GGTGGAAGCG GCACGGGCGG GAGAAGCCGG ACGGGGATTC 
GCCGTGGTCG CCGAAGAGGT GCGTAAACTG GCCAGTTCAT CCAAAGAACA GGTGGATGCC 
ACCACTCACA GCATCAACGA AGCGGTGCAA ACCATCGCGC ATATTCGCTC CATTGCTCAG 
CAAACGGTCA CAACAACGGC GCAAATGGCG GATAAAAGTA TCTCGGCGGC AAATCAAATC 
GCCGACATGA GTGCGGAAAC AGATAAAGAC CGGAGCAATA TGACGTCTAA TCTGGGTAAC 
CTTAAAAACC TGGCCAAAGG CATGGATGCG ATGCAGGATG CGGTTAACCA GTTGACTACT 
CTTCAAAAAC TGGCGTCATC CTAA 

 

Protein sequence

MSSFLSHITI PGLKRNRPAR GAYRCDALPS SLSALGLPSK PGLLLAFVPP EANFSEVNRA 
WQRFSAPNRT VITLSSTGAL CSQRNHSTYC DMNSPYGSWL WMPQSLIAKH EVHMVDLHVH 
DKHSARARIE GIKRELERLN VSMPLSSDNT FALIYCDGLA ASEGFLMQAW YACRRFPCLT 
IGGAAGGRLD FSGTYIGADN AVLQGKAVIV FCQMAPGKSF APFKSQNFEP TKQSWLVAEA 
DPVDRTVKSV FDASGHEQPI IEAIASCLRC HPHQIGEHLA GKTFAVKVND EYFVRSVASI 
KEDHISFFCD LEFGDRLYLM QSTDFISTTE RDWQQFVSQY GKPDLVLLND CVLRRAGNTE 
LEQAQFFDQV PAAGFSSFGE ILGVPINQTL SALAFFDHDV KAMTHFPVEY AAYAGHYAQR 
ALRRWEALHD IQSTVVKQVV DYEQALAPLL TAMPQLEQAT LRQSDTLDIA QTSIRAISES 
ASKTQEAQVR LETGLNDLER ISKGISQITS GINAIADKTN LLALNAAVEA ARAGEAGRGF 
AVVAEEVRKL ASSSKEQVDA TTHSINEAVQ TIAHIRSIAQ QTVTTTAQMA DKSISAANQI 
ADMSAETDKD RSNMTSNLGN LKNLAKGMDA MQDAVNQLTT LQKLASS