| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2048 |
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| Symbol | |
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| ID | 8119525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 2352033 |
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| End bp | 2352884 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644852435 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003004373 |
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| Protein GI | 251789652 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.218201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATGA AACACCACGC GTCACACTTT CTGCGCCATC TGTTGCTGGC CCTGGCAGGC
TGCGCGTTGC TGGCGGGGTG CAGCAGTAGT CATACGCTGA AAGGCAACAA AGAAGAGGGG
CTGAAACTGG CGCGTTTGTT GCGCGATCAG GGGCGGCAGG AAGCGGCGGC GGAGGTGTAT
GCGCGTCTTG ATGTGCGCGG CAAGCTGAAC GGCGCCGAGA TGCTGGAGTA TGCCACGGTG
GCCGGCCCGG TGCGTCAGCC GGCGGAAGCA CTGACGCTAT ATAGCCGCGC GCGTGATGCG
CTGGGCGGTC ATCTCGATGA GATGTCGGCG CCGCAAGCGA CAGCCATCTG CGTGGGGATG
GGGCGTGCGC AACTGGCGCT GGGCCGCACT GCCGCGGCGC AGCAGGATTT TGATTGCGCG
TTGCGCCGCG ATGCGGGTAA CGCCACCGCC CTGAACGGCA TGGGCGTGCT GCTGGATACG
CAAGGCCGCC ATGACGAGGC GCGTCGCCGC TTTGAACAGG CGCTGAGCAT TGAACCGGGC
AATATCGCGG TGATGAATAA TCTGGCGCTT TCCTGGCTGG CCAGCGGTCA GTCGGAGAAC
GCCATTAACC AGTTGCGCCG CGCCGATCTG AATAACCCGT CGGTACGCCT CAATCTGGCG
CTGGCGTGGT TGTATCAGGG CAACGAGGAC AACGCGCGTA ACGTGTTGAG CCAGATGGCG
GATGCCTCGC GTGTCGATGC GCTGATCACC CATCTCGGCG CGCGGGTGGC GAGGTTAAAA
AGCGGCAATG CCAGCGAAAC CTTGCTGATG GCCAGCACTC AGCCGCTTGC CCTGAGCGAT
AACACGCCAT GA
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| Protein sequence | MSMKHHASHF LRHLLLALAG CALLAGCSSS HTLKGNKEEG LKLARLLRDQ GRQEAAAEVY
ARLDVRGKLN GAEMLEYATV AGPVRQPAEA LTLYSRARDA LGGHLDEMSA PQATAICVGM
GRAQLALGRT AAAQQDFDCA LRRDAGNATA LNGMGVLLDT QGRHDEARRR FEQALSIEPG
NIAVMNNLAL SWLASGQSEN AINQLRRADL NNPSVRLNLA LAWLYQGNED NARNVLSQMA
DASRVDALIT HLGARVARLK SGNASETLLM ASTQPLALSD NTP
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