| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2020 |
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| Symbol | |
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| ID | 8119337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 2311885 |
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| End bp | 2313609 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644852407 |
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| Product | Pectate lyase |
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| Protein accession | YP_003004345 |
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| Protein GI | 251789624 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.742128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATA TCAGCATTAC ACTGAGTATC CCCAGCGCGG GCTTGCAGGG CGGACTGGGC
GGTGTTGGCG GTGCGGACCG CACCAGCAAT AACGGACTGG GCAGTAACGG GCTTTCCGGC
AATAAGACAT CGCAGGAAGG TAAATTACTG GAAGCACTGG CAGTCATTCT AACGTCGCTA
CTGGGTAACG CCGGTGCACA AGGAAATGGC GGTAATCCAT TAGAGCGCAG CAACGGCGCG
CTCGGTGGCG ATAATGGCGC CGGTAGCGCT GGTGGCGCAC AAGGCGGCGG TTTAGGCAAC
AGTCAGGGGC TGGGTGGCGG ACAGGGCCAG AATGGCCTGG GCGACCTGCT CACCAAATTG
CTGGATATAC TGATGCCGAA AGATGGGTCG CAGGGCGGTC AGGGTCTGCA GGGCAACGGC
GGCGTAGGCG GCAACGGCGG GCTTTCCGGC GCGCAGGGAG CCGGTGGCGC CCAAGGGGCT
GGAGGCACCT CCGGCCTGGA AGATCTCAGC AAATCATTGT TGCAGGATAC CGGTGAAAGC
GCGCTCAGCA ACGGCATCTC CCCGACACAA GATGGCGGCG GCCAGATCGG TGACAACCCG
CTGCTGAAAA TTCTGTTGGC GCTGGTCGCG ATGCTGATGG AAAACCAGAA AAATCAGTTC
GGTCAACCGC AGGACGGCGC AGGCAATAAT AGCGGCGGCA GCTCGACACC GTCTGTGGGC
GGCGGTGCTG GTGGCGGTGC TTCTCCGTCT GTGGGCGGCG GCGCCGGTGG CGGTGCTTCT
CCGTCTGTGG GCGGCGGCGC TGGTGGCGGT GCCTCTCCGT CTGTGGGCGG CGGTGCCGGT
GGCGGAGCCT CGCCGTCTGT GGGCGGCGGC GCCGGTGGCG GTGCTTCTCC GTCTGTGGGT
GGCGGCGCTG GTGGCGGTGC CTCTCCGTCT GTGGGTGGTG GCGCTGGTGG CGGAGCCTCT
CCGTCTGTGG GCGGTGGTGC CGGCGGCAGC ACGACCCCGT CTGTGGGTGG CGGCGGTGGC
GCGGCTTCAT CTGTGGGTGG CGGCAATGCA ACGGGCGCAA CCGGTGATAG CGGCACAGCA
TCAACCAGCA GTGCCGGTAA GTCTGGCCCG GTATCCTTCC CCACGGCGGA TAATGCCAAT
GCGATTGTAG TCAATGAACC GATCAAAGTC GGGCCGGGTG AAGTCTTTGA CGGTAAAGGC
AAAACCTACG TTGCCGGCCC GGCATTAGGT GACGGCGGCC AGAAAGAAGG ACAAAAACCG
CTGTTTGAAG TGGCCGACGG TGGTTCCGTC AAGAACGTGA CTTTCGGCAA TAACGCGGCT
GATGGTATCC ATCTGCACGG CGATGCCAAA ATCGATAACG TACACTGGAC TAACGTTGGT
GAAGACGCGT TGACGGTGAA GAGCAACACC GGTAAACCGG CTAACGTCTC TATCACCAAC
AGCAGCGCCC AGGGTGCTTC CGACAAAATA TTCCAGTTGA ATGCGGATGC CAACTTCAAC
GTCGATAACT TCAAGGCGAA AGACTTCGGG ACCTTCGTCC GTACCAACGG CGGCCAGCAG
GGTAACTGGA ATCTCAACCT GAGCAATATC GATGCGCAGA ACGGTAAGTT CTCGTTTGTG
AAAAGCGACA GTGAAGGGCT GAACGTGAAA GTTAACAATG CCAACCTGGA TAACGTCAAC
AATCACTACA AAGTTCCTAA ATCCACCAAC CTGCAAGTAA GCTGA
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| Protein sequence | MADISITLSI PSAGLQGGLG GVGGADRTSN NGLGSNGLSG NKTSQEGKLL EALAVILTSL
LGNAGAQGNG GNPLERSNGA LGGDNGAGSA GGAQGGGLGN SQGLGGGQGQ NGLGDLLTKL
LDILMPKDGS QGGQGLQGNG GVGGNGGLSG AQGAGGAQGA GGTSGLEDLS KSLLQDTGES
ALSNGISPTQ DGGGQIGDNP LLKILLALVA MLMENQKNQF GQPQDGAGNN SGGSSTPSVG
GGAGGGASPS VGGGAGGGAS PSVGGGAGGG ASPSVGGGAG GGASPSVGGG AGGGASPSVG
GGAGGGASPS VGGGAGGGAS PSVGGGAGGS TTPSVGGGGG AASSVGGGNA TGATGDSGTA
STSSAGKSGP VSFPTADNAN AIVVNEPIKV GPGEVFDGKG KTYVAGPALG DGGQKEGQKP
LFEVADGGSV KNVTFGNNAA DGIHLHGDAK IDNVHWTNVG EDALTVKSNT GKPANVSITN
SSAQGASDKI FQLNADANFN VDNFKAKDFG TFVRTNGGQQ GNWNLNLSNI DAQNGKFSFV
KSDSEGLNVK VNNANLDNVN NHYKVPKSTN LQVS
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