Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1982 |
Symbol | |
ID | 8119299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 2264605 |
End bp | 2265402 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644852372 |
Product | PTS system, mannose/fructose/sorbose family, IIC subunit |
Protein accession | YP_003004310 |
Protein GI | 251789589 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
TIGRFAM ID | [TIGR00822] PTS system, mannose/fructose/sorbose family, IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGATCA CCACGTTTCA AATCGTGCTG ATATTTATCG TGGCCTGTAT TTCAGGTATG GGTTCCATTC TCGACGAGTT TCAGTTCCAC CGCCCTCTGG TGGCGTGTAC CCTCATCGGG TTGGTACTGG GCGACCTCAA AACCGGGATC ATCATCGGCG GTACGCTGGA AATGATAGCG CTAGGCTGGA TGAACATCGG TGCCGCCGTA GCGCCCGATG CGGCGCTGGC TTCCATTATT TCCACCATAC TGGTTATCGC CGGTGGGCAG AGCGTCGGTG CCGGGATAGC CCTGGCGATT CCACTCGCCG CCGCCGGCCA GGTATTGACC ATTATCGTGC GTACCATCAC CGTTGCTTTC CAACATGCGG CGGATAGTGC GGCTGAACGC GGCAATCTTT CCGCCATCAG TTGGATTCAT GTCTCCGCGC TGCTGCTGCA AGCCATGCGC ATCGCCATTC CGGCGGTGAT TGTTGCGGTC TCGGTCGGAA CCGAGGCGGT ACACAGCCTG CTTTCCTCTA TCCCCGAGGT GGTCACCACC GGTCTGAACA TCGCCGGCGG CATGATTGTG GTCGTCGGTT ACGCGATGGT CATCAACATG ATGCGTGCCG GTTACCTGAT GCCGTTTTTC TATTTGGGTT TCGTCACCGC CGCCTTTACC AATTTCAATC TGGTCGCACT GGGAGTCATC GGTGTTGTTA TGGCCGTGCT GTATATCCAG CTCAGCCCTA AATACAACAA AGCCCAGGGT ATGGCGGCTG CATCGTCAAA TAACGATCTT GATAATGAAC TGGATTAA
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Protein sequence | MEITTFQIVL IFIVACISGM GSILDEFQFH RPLVACTLIG LVLGDLKTGI IIGGTLEMIA LGWMNIGAAV APDAALASII STILVIAGGQ SVGAGIALAI PLAAAGQVLT IIVRTITVAF QHAADSAAER GNLSAISWIH VSALLLQAMR IAIPAVIVAV SVGTEAVHSL LSSIPEVVTT GLNIAGGMIV VVGYAMVINM MRAGYLMPFF YLGFVTAAFT NFNLVALGVI GVVMAVLYIQ LSPKYNKAQG MAAASSNNDL DNELD
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