| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1968 |
|---|
| Symbol | |
|---|
| ID | 8119285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2250202 |
|---|
| End bp | 2251104 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644852358 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003004296 |
|---|
| Protein GI | 251789575 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.634652 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATA TTCATTCCCC ACTGTCTGCG CAGAGTATCG CTGCGGCAGA AGTTCGCCGC
ACGCTGCGCC GTGAAAAAAT CAATGCGGCC ATCCGCTACA TTATTTTGCT GTTCGTCGGC
ATTCTGATGC TCTATCCGTT GGCGTGGATG TTCTCTGCAT CGTTCAAACC GAACCATGAG
ATTTTCACGA CCCTCAGCCT GTGGCCGGCA CACGCCACCT GGGATGGCTT TATCAACGGC
TGGAAAACCG GCACTGAGTA CAACTTCGGT CACTACATGA TCAATACCTT CCAGTATGTG
ATTCCGAAAG TGGTACTGAC GGTTATCTCT TCCACCATCG TGGCTTATGG TTTTGCCCGG
TTTGAAATTC CGTGGAAAAA CTTTTGGTTC GCGACCCTGA TCGCCACCAT GTTGCTGCCA
AGTACCGTTT TACTGATTCC GCAGTACATC ATGTTCCGTG AAATGGGCAT GTTGAACAGC
TATCTGCCGT TGTATGTGCC GGTCGCATTC GCTACGCATG GGTTCTTTGT ATTCATGCTG
ATCCAGTTCC TGCGCGGCGT ACCGCGTGAT ATGGAAGAAG CCGCACAGAT CGATGGTTGT
AACTCCTGGC AGGTATTGTG GTACGTCGTC GTGCCTATTC TGAAACCGGC CATCATTTCG
GTTGCGCTGT TCCAGTTCAT GTGGTCAATG AACGACTTTA TCGGCCCGCT GATTTACGTT
TACAGCGTGG ACAAATACCC GATTGCGCTG GCTCTGAAAA TGTCTATCGA CGTAACAGAA
GGCGCACCGT GGAACGAAAT TCTGGCAATG GCGAGTATCT CCATTCTGCC GTCCATCATT
ATTTTCTTCA TGGCTCAGCG CTACTTCGTT CAGGGCGTTA CCAGCAGCGG AATTAAAGGT
TAA
|
|---|
| Protein sequence | MADIHSPLSA QSIAAAEVRR TLRREKINAA IRYIILLFVG ILMLYPLAWM FSASFKPNHE
IFTTLSLWPA HATWDGFING WKTGTEYNFG HYMINTFQYV IPKVVLTVIS STIVAYGFAR
FEIPWKNFWF ATLIATMLLP STVLLIPQYI MFREMGMLNS YLPLYVPVAF ATHGFFVFML
IQFLRGVPRD MEEAAQIDGC NSWQVLWYVV VPILKPAIIS VALFQFMWSM NDFIGPLIYV
YSVDKYPIAL ALKMSIDVTE GAPWNEILAM ASISILPSII IFFMAQRYFV QGVTSSGIKG
|
|---|
| |