| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1962 |
|---|
| Symbol | |
|---|
| ID | 8119279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2243325 |
|---|
| End bp | 2244716 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644852352 |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | YP_003004290 |
|---|
| Protein GI | 251789569 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1823] Predicted Na+/dicarboxylate symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.152982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTC CGCTGATAAT AAATGTGGTT GTTTTTGCTG TGCTGCTTTT TGCACTAGGG
TATAGCGGTA ATAAAAATTG GAGTCTGTCG AAAAAGGTGT TGCTGGGTCT GATAACCGGC
GTCCTGTTTG GGTTGGTATT ACACCTGATT TATGGCGATG ACAATCCTGT CATCAAACAG
TCTATTGCCT GGTTCAATAT TGTCGGCAAC GGCTATGTAC AATTATTGCA AATGATTGTG
ATGCCGCTGG TGTTCGTGTC GATACTGAAT TCCGTTGCCC GGCTGCATAA CGCCTCCTCG
CTGGGAAAAA TCAGCCTGCT TGCACTCGGC ACATTGCTAT TTACCACGCT GATCGCCGCC
TTAATTGGTA TTTTTGTAAC CAATCTGTTT GGCCTGACCG CTTCCGGGTT GGTACAAGGC
GCGCAGGAAA GTGCTCGCCT GTCGACCATT CAGAATAGCT ATGCCGGCAA GGTCGCCGAC
CTGAACGTAC CGCAGCTGTT GCTGTCGTTT ATCCCTAAAA ATCCGTTTGC CGACCTGACC
GGCGCCAACC CGACGTCTAT CATCAGCGTG GTCATTTTCG CCGCGTTTCT CGGCGTTGCG
GCATTGCACT TGTTAAAAGA CGATGCGGTA AAAGGCGAAC GCGTCCTGAC AGCGATTGAT
ACCCTGCAAT CCTGGGTAAT GAAACTGGTT CGGCTGGTGA TGCGCCTCAC ACCTTATGGC
GTAATGGCGC TGATGACGAA AATGGTTGCC AGCTCCAATC TGCAGGATAT TCTCAAACTG
GGCGGTTTTG TTGTGGCGTC CTACCTCGGT CTGGGATTGA TGTTTGGCGT ACATGCCCTA
TTGTTGGCGA TGACCGGCGT GAATCCGGCC CGTTTTTATC GCAAAGTGTG GCCGGTGCTA
AGTTTCGCCT TCACCAGTCG CTCCAGCGCC GCCACTATTC CGCTGAATAT TGAGGCTCAG
ACACGCCGTA TCGGTGTGCC GGAATCCATC GCCAGTTTTG CCGCCTCTTT TGGCACGACC
ATCGGTCAGA ACGGCTGTGC CGGGCTGTAC CCAGCCATGC TGGCCGTCAT GGTCGCACCG
ACCGTCGGCA TCAACCCCTG GGATCCGATG TGGATCGCCA CCCTGGCAGG CATTGTCACC
CTCAGTTCCG CGGGGGTAGC CGGTGTCGGC GGCGGCGCTA CCTTCGCCGC GCTAATCGTC
CTGCCGGCGA TGGGATTACC CGTCACACTG GTTGCCCTGT TGATTTCGAT TGAGCCATTA
ATCGACATGG GGCGCACGGC ACTCAATGTC AGTGGGTCAA TGACAGCCGG CACGCTGACC
AGCCAGTGGC TAAAACAAAC CGATAAAGAC GTGTTCACTC GTGATGACGA TACGGCATTA
ACTCACCGTT AA
|
|---|
| Protein sequence | MNFPLIINVV VFAVLLFALG YSGNKNWSLS KKVLLGLITG VLFGLVLHLI YGDDNPVIKQ
SIAWFNIVGN GYVQLLQMIV MPLVFVSILN SVARLHNASS LGKISLLALG TLLFTTLIAA
LIGIFVTNLF GLTASGLVQG AQESARLSTI QNSYAGKVAD LNVPQLLLSF IPKNPFADLT
GANPTSIISV VIFAAFLGVA ALHLLKDDAV KGERVLTAID TLQSWVMKLV RLVMRLTPYG
VMALMTKMVA SSNLQDILKL GGFVVASYLG LGLMFGVHAL LLAMTGVNPA RFYRKVWPVL
SFAFTSRSSA ATIPLNIEAQ TRRIGVPESI ASFAASFGTT IGQNGCAGLY PAMLAVMVAP
TVGINPWDPM WIATLAGIVT LSSAGVAGVG GGATFAALIV LPAMGLPVTL VALLISIEPL
IDMGRTALNV SGSMTAGTLT SQWLKQTDKD VFTRDDDTAL THR
|
|---|
| |