| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1948 |
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| Symbol | |
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| ID | 8119265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 2230206 |
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| End bp | 2231372 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644852338 |
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| Product | Oligogalacturonide lyase |
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| Protein accession | YP_003004276 |
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| Protein GI | 251789555 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000264473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAG GTAAAAAGCT TTCTTTTACG TTCCATACCT ACCAGGATTC AGTCACCGGC
ACCGAAGTGG TGCGTCTCAC CCCTCCCGAT GTCATCTGCC ACCGCAACTA CTTCTATCAG
AAATGTTTTT CCAATGATGG TAGCAAGCTG CTGTTTGGTG GTGCATTTGA TGGGCCGTGG
AACTATTACT TGTTAGATCT GAAAACGCAG CAAGCCACTC AGCTGACCGA AGGTACAGGT
GACAATACGT TTGGCGGCTT CCTGTCTCCG AATGACGATG CGCTTTATTA TGTGAAGAAT
GTCCGTAACT TGATGCGCGT TGATCTTAAT ACACTGGAAG AAACCAATAT TTATCAGGTA
CCGGATGATT GGGTTGGGTA CGGTACTTGG GTTGCCAACT CTGATTGCAC CAAGATGGTG
GGTATCGAGA TCAAGAAAGA GGATTGGAAA CCATTGACCG ACTGGAAAAA ATTCCAGGAG
TTCTATTTTA CCAATCCATG CTGCCGTTTG ATTCGTATTG ACCTGAAAAC CGGTGAAGCG
ACAACGATTC TGCAGGAAAA ACAGTGGTTG GGTCATCCTA TTTATCGTCC TGGCGATGAC
AATACGGTCG CGTTCTGCCA TGAAGGCCCA CATGATTTGG TTGATGCCCG CATGTGGTTT
ATCAATGAAG ACGGCACCAA TATGCGCAAA GTGAAAGAAC ATGCGCTGGG GGAAAGCTGT
ACTCATGAAT TCTGGGTGCC GAATGGCTCT GCGCTGGCTT ATGTTTCTTA CCTGAAAGGC
AGCACTAACC GTTTCATTTG CAGCGTTGAC CCCGTCACGT TGGAAAACCG TCAGTTAACA
GAGATGCCGC CTTGTTCCCA CTTGATGAGT AACTATGATG GCTCTCTGAT GGTTGGGGAT
GGTTGTAACG CGCCGGTAGA CGTGAAAGAT GACGGCGGCT ACAAAATCGA GAACGATCCT
TTCCTGTATG TGTTCAACAT GAAGACCGGG AAACATTTCC AGGTTGCGCA ACATAATACT
TCATGGGAAG TGTTGGAAGG TGACCGTCAG GTAACGCATC CGCATCCATC TTTCACACCG
GATGATAAAC ATATTCTGTT TACGTCTGAT GTCGATGGTA AGCCGGCGTT GTATCTGGCT
AAAGTGCCTG ATTCCGTGTG GCAATAA
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| Protein sequence | MAKGKKLSFT FHTYQDSVTG TEVVRLTPPD VICHRNYFYQ KCFSNDGSKL LFGGAFDGPW
NYYLLDLKTQ QATQLTEGTG DNTFGGFLSP NDDALYYVKN VRNLMRVDLN TLEETNIYQV
PDDWVGYGTW VANSDCTKMV GIEIKKEDWK PLTDWKKFQE FYFTNPCCRL IRIDLKTGEA
TTILQEKQWL GHPIYRPGDD NTVAFCHEGP HDLVDARMWF INEDGTNMRK VKEHALGESC
THEFWVPNGS ALAYVSYLKG STNRFICSVD PVTLENRQLT EMPPCSHLMS NYDGSLMVGD
GCNAPVDVKD DGGYKIENDP FLYVFNMKTG KHFQVAQHNT SWEVLEGDRQ VTHPHPSFTP
DDKHILFTSD VDGKPALYLA KVPDSVWQ
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