| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1944 |
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| Symbol | |
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| ID | 8119261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 2223568 |
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| End bp | 2224224 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644852334 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003004272 |
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| Protein GI | 251789551 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.469445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTTTGT CATTCACAGC CAGTAATAAG ATGAATAAAT TCCCTGTTAA AAATCACCGA
CTTAAACGAT TCAGCTCTCG GCCAAAAAAA AATGTGCCGA CGGCGGCGGC ACAGGCGCGC
ATCGTTTTGT TCAATAAACC TTTCGATGTC CTGTCACAGT TTACCGATGA AGGCAGCCGC
GCTACGCTGA AAGATTATGT CCCCTTGCGC GATATCTATG CTGCCGGCAG ATTAGACCGG
GACAGCGAAG GTCTGATGAT ACTGACTAAC GATGGTCAAT TGCAGGCTCG CCTGACACAA
CCCGGCAAGA AAACCCCTAA AATTTATTAC GCTCAGGTTG AAGGTATTCC CGACGACGAG
GCCCTTCACG CTTTTCGAAC CGGCCTGCAA CTCAACGACG GCACGACATT GCCGGCAGGT
GCCGAGCGAG TGGAGGAACC CGCATGGCTA TGGCCGCGCC AGCCGCCAAT CCGCGAGCGA
AAAAACATTC CGGTTAGCTG GCTCAAAATC ACGCTGTACG AAGGCCGTAA CCGGCAGGTA
AGGCGCATGA CGGCGCATAT TGGTTATCCG ACGTTGCGTT TGATTCGTTA CAGTATGGCT
AACCAGACTC TTGATGGGTT ATCTCCCGGC GAATGGAAGG AAATCGACCA TGTTTAA
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| Protein sequence | MVLSFTASNK MNKFPVKNHR LKRFSSRPKK NVPTAAAQAR IVLFNKPFDV LSQFTDEGSR
ATLKDYVPLR DIYAAGRLDR DSEGLMILTN DGQLQARLTQ PGKKTPKIYY AQVEGIPDDE
ALHAFRTGLQ LNDGTTLPAG AERVEEPAWL WPRQPPIRER KNIPVSWLKI TLYEGRNRQV
RRMTAHIGYP TLRLIRYSMA NQTLDGLSPG EWKEIDHV
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