Gene Dd1591_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1940 
Symbol 
ID8119417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2219237 
End bp2220604 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content53% 
IMG OID644852330 
Productadenylosuccinate lyase 
Protein accessionYP_003004268 
Protein GI251789547 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAT CCTCACTGAC CGCCGTTTCC CCCATTGATG GACGCTACGG CGATAAAGTC 
AGCATGTTGC GCACTATTTT CAGCGAATAC GGCCTGCTGA AATTCCGTGT GCAGGTTGAA
GTACGTTGGC TGCAAAAATT GGCGGCCTGT GCAGAAATCA AGGAAGTTCC TGCATTTGAT
GCCGACGCAA ACGCTTTCCT TGACAATATT GTCGCCGAAT TCAGCGAAGA AGACGCCGCG
CGCATTAAAA CCATCGAGCG CACCACCAAC CACGACGTCA AAGCAGTCGA ATATTTCCTG
AAAGAAAAAG TGGCGGCGGT GCCGGCACTG AATGCGGTAA ACGAGTTTAT CCACTTCGCC
TGTACTTCCG AAGATATCAA CAACCTGTCC CATGCCCTGA TGCTGGACAC CGCCCGTCGC
GATGTGCTGT TACCGTTCTG GCGTAATATC ATTGATGCCA TCAAACAGCT GGCGCAGCAG
TATCGCGATA TTCCGCTGCT GTCCCGTACT CACGGCCAGC CGGCTACGCC GTCGACTATC
GGTAAAGAGT TCGCGAACGT CGCCTATCGA ATGGAGCGCC AGTTCCGTCA ACTGCAACAG
GTGGAAATCC TGGGCAAAAT CAACGGCGCC GTAGGCAACT ATAACGCCCA TATGGTGGCG
TATCCTGCGG TTGACTGGCA CCAGTTCAGC GAAAGTTTCG TGACCTCGCT GGGTATTCAG
TGGAACCCCT ACACCACGCA AATCGAACCC CACGACTATA TTGCCGAGTT GTTCGATTGC
ATCGCCCGTT TCAATACCAT TCTGATCGAT TTTGACCGTG ATATATGGGG TTACATTGCC
CTTAACCACT TCAAACAGAA AACCATCGCC GGTGAAATCG GCTCCTCCAC CATGCCGCAC
AAAGTTAATC CGATCGATTT CGAAAACTCC GAAGGCAATC TGGGGCTGGC GAACGCGGTA
ATGAGCCACC TTGCCAGCAA ACTGCCGGTA TCACGCTGGC AGCGCGATCT GACCGACTCT
ACGGTGCTGC GTAACCTGGG TGTGGGAGTC GGCTATGCCG TCATCGCTTA TCAGGCGTCG
CTAAAAGGCA TCAGCAAACT GGAAGTCAAT CGTGACCATC TGCTGGATGA ATTGGACCAC
AACTGGGAAG TTCTGGCTGA ACCGATCCAG ACAGTAATGC GTCGTTACGG TATTGAAAAA
CCGTACGAGA AACTGAAAGA ACTGACCCGC GGCAAACGTG TCGACGCCGA AGGGATGAAA
GCCTTTATCG ATGGTCTGGC GTTGCCGGAT GACGAAAAAA CACGTCTTAA AGCCCTGACC
CCGGCCAATT ACATCGGCCG CGCCGTCAAC ATGGTTGACG AACTCTAA
 
Protein sequence
MELSSLTAVS PIDGRYGDKV SMLRTIFSEY GLLKFRVQVE VRWLQKLAAC AEIKEVPAFD 
ADANAFLDNI VAEFSEEDAA RIKTIERTTN HDVKAVEYFL KEKVAAVPAL NAVNEFIHFA
CTSEDINNLS HALMLDTARR DVLLPFWRNI IDAIKQLAQQ YRDIPLLSRT HGQPATPSTI
GKEFANVAYR MERQFRQLQQ VEILGKINGA VGNYNAHMVA YPAVDWHQFS ESFVTSLGIQ
WNPYTTQIEP HDYIAELFDC IARFNTILID FDRDIWGYIA LNHFKQKTIA GEIGSSTMPH
KVNPIDFENS EGNLGLANAV MSHLASKLPV SRWQRDLTDS TVLRNLGVGV GYAVIAYQAS
LKGISKLEVN RDHLLDELDH NWEVLAEPIQ TVMRRYGIEK PYEKLKELTR GKRVDAEGMK
AFIDGLALPD DEKTRLKALT PANYIGRAVN MVDEL