| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1912 |
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| Symbol | |
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| ID | 8119389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 2179295 |
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| End bp | 2180971 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644852303 |
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| Product | Polypeptide-transport-associated domain protein ShlB-type |
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| Protein accession | YP_003004241 |
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| Protein GI | 251789520 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTCA GTAGCAGGAA AACCGGCCTG ATCGCCTGTC TTTCCCTTAT CGGTTATACC
GCCTCTGCGT TTTCCGCATC GTTGAACCCG GCGGAGCGAA ACGACATTCA GCAACGCCAG
TCGGAAGTGA TTGAACAATC CCGCCAGCAG CGTGAAGCAT TACAGCAGTT AAACGACATT
GCGCAGGCGC CGCTGAAAGC GGATAACGCG CCGCAAGGCC CTTGTTTTAC CCTGCGCGAC
ATCCGTTTTA ATCACAGTAC CTTGTTGCGC CCGAGCGACC AGGCGACGCT GGTCGCAGGC
TACCTTAATC GTTGCAATAA CCTTGAACAA ATCAACCAAC TGGTGCACGA CGTCAGCAAC
TGGTATATCC AGCGCGGCTA TATCACCAGT CGTGCCTTTT TGAGCGAGCA GGATTTATCG
GGCGGCGTAC TGCAACTGGA GATCCTGGAA GGCCGGCTGG AAAAGATCAC CATCAATAAC
CAGACGGAAC GGATGACCCG GACGGCCTTC CCGGCACATG CAGGGGAGAT CCTGAACCTG
CGCGATATTG AGCAAGGCAT GGAACAGATG AACCGGATGC CGTCTCAGCA GGTCACTATC
GAGATCCAAC CGGGCAGCCA GCCGGGATAT TCGGTGGTGA ATCTGACGCG TGAAGCGCAT
TTACCGTTTA GCGGAGGGCT GACTTTCGAT AACAGCGGCC AGAAAAGCAC CGGCGAAGAG
CAGCTTAACG GCAGCCTGGC GCTGGATAAT GTGTTCGGCT TGGCTGATCA ATGGTTCATC
AGCGCCGGCC ATAGCAGCCG CTTTGCCACC AGTCACGATG CCGAAAGCCT GCAAGCCGGT
TTCTCGATGC CGTATGGTTA CTGGAACCTG GGCTACAACT ATTCCCAAAG TCGTTACCGC
AATACCTTTA TCAACCGCGA TTTTCCCTGG CATTCCACCG GCGACAGCGA TACCCACCGG
TTTTCGCTGT CCCGCGTCGT GTTCCGCGAC GGCACGATGA AAACCGCCAT TGCCGGCACG
TTTAGCCAGC GAACCGGTAA CAACTATCTC AACGGATCGT TATTGCCGTC CAGCAGCCGC
AAACTGAGCA GTGTGTCGCT GGGCGTCAAT CACAGTCAGA AACTGTGGGG CGGCCTGGCG
ACGTTTAACC CGACGTATAA CCGTGGTGTG CGCTGGTTAG GCTCAGAAAC CGACACCGAC
AAAAGCGCGG ACGAACCGCG CGCCGAGTTC AATAAATGGA CGCTGTCGGC CAGTTACTAT
CACCCCGTGA CCGATAGCAT CACCTACCTC GGCAGCCTGT ACGGCCAGTA TTCGGCCCGG
GCGCTGTACG GCAGCGAACA ACTGACGCTG GGCGGGGAAT CCTCCATACG CGGATTCCGC
GAGCAGTACA CCTCCGGCAA TCGAGGCGCT TACTGGCGTA ACGAACTGAA CTGGCAGGCA
TGGCAGTTGC CGGTGCTGGG TAACGTCACC TTCATGGCAG CGGTGGATGG CGGTCATTTG
TATAACCATA AACAAGATAA CTCGACGGCG GCCTCACTAT GGGGCGGTGC CGTCGGCATG
ACCGTTGCCA GCCGCTGGTT GAGCCAACAG GTAACCGTGG GATGGCCGAT TTCCTACCCG
GCATGGTTAC AACCCGACAC CATGGTGGTG GGGTATCGGG TAGGGCTGTC GTTTTAA
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| Protein sequence | MPVSSRKTGL IACLSLIGYT ASAFSASLNP AERNDIQQRQ SEVIEQSRQQ REALQQLNDI
AQAPLKADNA PQGPCFTLRD IRFNHSTLLR PSDQATLVAG YLNRCNNLEQ INQLVHDVSN
WYIQRGYITS RAFLSEQDLS GGVLQLEILE GRLEKITINN QTERMTRTAF PAHAGEILNL
RDIEQGMEQM NRMPSQQVTI EIQPGSQPGY SVVNLTREAH LPFSGGLTFD NSGQKSTGEE
QLNGSLALDN VFGLADQWFI SAGHSSRFAT SHDAESLQAG FSMPYGYWNL GYNYSQSRYR
NTFINRDFPW HSTGDSDTHR FSLSRVVFRD GTMKTAIAGT FSQRTGNNYL NGSLLPSSSR
KLSSVSLGVN HSQKLWGGLA TFNPTYNRGV RWLGSETDTD KSADEPRAEF NKWTLSASYY
HPVTDSITYL GSLYGQYSAR ALYGSEQLTL GGESSIRGFR EQYTSGNRGA YWRNELNWQA
WQLPVLGNVT FMAAVDGGHL YNHKQDNSTA ASLWGGAVGM TVASRWLSQQ VTVGWPISYP
AWLQPDTMVV GYRVGLSF
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