Gene Dd1591_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1882 
Symbol 
ID8119359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2151273 
End bp2152358 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content57% 
IMG OID644852273 
Producttype III secretion protein, YscU/HrpY family 
Protein accessionYP_003004211 
Protein GI251789490 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR01404] type III secretion protein, YscU/HrpY family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA AAACCGAAAA ACCCACCCCC AAAAAATTGC AGGATGCCCG CAAAAAAGGG 
GAAGTAGGCC AAAGTCAGGA TGTGCCCAAG CTGCTGATCA GTTTTGCCTT GCTGGAGATG
ATTCTGGCAT TGACCGACAG CGGCATGAGC AAATTACAGG CGCTGATGCA ATTGCCGCTG
AGCCGCATTT CCGACCCTTT CGGCCATGCC GCCGATGAAG TTTTCAGCGA AGCGCTGGCG
CTGCTGGCCA CCTTTTGCCT GCTGACCATC AGCGTAGCGC TGCTGATGCG TATTGTCGGC
GGCTGGATCC AGTACGGCCC GTTGTTCGCC GTGGAAGCGC TGAAACTCGA CTTCAACCGC
CTCAACCCGA TCAATCAAAT TAAGCAAATG TTCACCATGC GCAAGCTCAC CGACATGCTG
ACCAACCTGC TGAAGGCGAC GACCATCGGG TTGGTCTTTT GGCTGGTGGT TACCCCGCAA
CTGGAGTGGC TGGTGGAGCT GGCTTACGGC GATCTGACCG CATTCTGGAA AGGTGTGGAA
AACGTACTGA AAAGCGTGTC GCGCACCACC CTTTCCGCGC TACTGGCGCT GGGCGTATTC
GACTTCGGGT TGCAGAAATA TTATTTCCTC AAACAGCAGC GCATGAGCCA CGAAGATATC
CGTAACGAGT ACAAAAACTC GGAAGGCGAC CCCCACATGA AAGGGCACCG AAAATCCGTA
GCGCAGGAAA TTCTCAACGA ACCGGCCAGC CCGCGCGTCA AACCCAAAGT GGAAGACGCC
GATCTGCTGC TGGTCAACCC GACTCACTAC GCGGTGGCGC TGTTCTACCG GCCCGGCAAG
ACGCCGCTGC CACGCATTCT GCTCAAAGGC GAGGATGATC ACGCCAGGGC GTTGATCGCC
CGCGCACATC AGGCCGGCGT GCCGGTGATC CGCTTCATCT GGCTGGCGCG CACCCTGTAC
CGGGTGCCCG AAGGCCACTA CATCCCGCGC GACACCCTGC AACCGGTTGC GCAGGTCTAT
AAGGTACTGC GACAATTGGA GAAAGACCTG CCGCAGCGGG AGCATAATGT GATTGAGATG
GGGTGA
 
Protein sequence
MSEKTEKPTP KKLQDARKKG EVGQSQDVPK LLISFALLEM ILALTDSGMS KLQALMQLPL 
SRISDPFGHA ADEVFSEALA LLATFCLLTI SVALLMRIVG GWIQYGPLFA VEALKLDFNR
LNPINQIKQM FTMRKLTDML TNLLKATTIG LVFWLVVTPQ LEWLVELAYG DLTAFWKGVE
NVLKSVSRTT LSALLALGVF DFGLQKYYFL KQQRMSHEDI RNEYKNSEGD PHMKGHRKSV
AQEILNEPAS PRVKPKVEDA DLLLVNPTHY AVALFYRPGK TPLPRILLKG EDDHARALIA
RAHQAGVPVI RFIWLARTLY RVPEGHYIPR DTLQPVAQVY KVLRQLEKDL PQREHNVIEM
G