Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1882 |
Symbol | |
ID | 8119359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 2151273 |
End bp | 2152358 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644852273 |
Product | type III secretion protein, YscU/HrpY family |
Protein accession | YP_003004211 |
Protein GI | 251789490 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
TIGRFAM ID | [TIGR01404] type III secretion protein, YscU/HrpY family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAA AAACCGAAAA ACCCACCCCC AAAAAATTGC AGGATGCCCG CAAAAAAGGG GAAGTAGGCC AAAGTCAGGA TGTGCCCAAG CTGCTGATCA GTTTTGCCTT GCTGGAGATG ATTCTGGCAT TGACCGACAG CGGCATGAGC AAATTACAGG CGCTGATGCA ATTGCCGCTG AGCCGCATTT CCGACCCTTT CGGCCATGCC GCCGATGAAG TTTTCAGCGA AGCGCTGGCG CTGCTGGCCA CCTTTTGCCT GCTGACCATC AGCGTAGCGC TGCTGATGCG TATTGTCGGC GGCTGGATCC AGTACGGCCC GTTGTTCGCC GTGGAAGCGC TGAAACTCGA CTTCAACCGC CTCAACCCGA TCAATCAAAT TAAGCAAATG TTCACCATGC GCAAGCTCAC CGACATGCTG ACCAACCTGC TGAAGGCGAC GACCATCGGG TTGGTCTTTT GGCTGGTGGT TACCCCGCAA CTGGAGTGGC TGGTGGAGCT GGCTTACGGC GATCTGACCG CATTCTGGAA AGGTGTGGAA AACGTACTGA AAAGCGTGTC GCGCACCACC CTTTCCGCGC TACTGGCGCT GGGCGTATTC GACTTCGGGT TGCAGAAATA TTATTTCCTC AAACAGCAGC GCATGAGCCA CGAAGATATC CGTAACGAGT ACAAAAACTC GGAAGGCGAC CCCCACATGA AAGGGCACCG AAAATCCGTA GCGCAGGAAA TTCTCAACGA ACCGGCCAGC CCGCGCGTCA AACCCAAAGT GGAAGACGCC GATCTGCTGC TGGTCAACCC GACTCACTAC GCGGTGGCGC TGTTCTACCG GCCCGGCAAG ACGCCGCTGC CACGCATTCT GCTCAAAGGC GAGGATGATC ACGCCAGGGC GTTGATCGCC CGCGCACATC AGGCCGGCGT GCCGGTGATC CGCTTCATCT GGCTGGCGCG CACCCTGTAC CGGGTGCCCG AAGGCCACTA CATCCCGCGC GACACCCTGC AACCGGTTGC GCAGGTCTAT AAGGTACTGC GACAATTGGA GAAAGACCTG CCGCAGCGGG AGCATAATGT GATTGAGATG GGGTGA
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Protein sequence | MSEKTEKPTP KKLQDARKKG EVGQSQDVPK LLISFALLEM ILALTDSGMS KLQALMQLPL SRISDPFGHA ADEVFSEALA LLATFCLLTI SVALLMRIVG GWIQYGPLFA VEALKLDFNR LNPINQIKQM FTMRKLTDML TNLLKATTIG LVFWLVVTPQ LEWLVELAYG DLTAFWKGVE NVLKSVSRTT LSALLALGVF DFGLQKYYFL KQQRMSHEDI RNEYKNSEGD PHMKGHRKSV AQEILNEPAS PRVKPKVEDA DLLLVNPTHY AVALFYRPGK TPLPRILLKG EDDHARALIA RAHQAGVPVI RFIWLARTLY RVPEGHYIPR DTLQPVAQVY KVLRQLEKDL PQREHNVIEM G
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