| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1840 |
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| Symbol | yebU |
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| ID | 8117323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 2098706 |
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| End bp | 2100154 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644852232 |
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| Product | rRNA (cytosine-C(5)-)-methyltransferase RsmF |
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| Protein accession | YP_003004170 |
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| Protein GI | 251789449 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00446] NOL1/NOP2/sun family putative RNA methylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCAAAC CTATTCCCGC CTCTCTCATT CCCGATTTTT TAACCGCCAT GCAAGCCATT
ATGCCTGCAC ACCTGAGCAT GGATGACTTC ATCGACGCCT GCCGGCGACC GCTGCGCCGT
AGTCTTCGCG TCAACACGTT GAAAATCAGC GTGCCCGACT TTCTCGCGCT GGTCGCGCCC
TACGGTTGGG AACTGGAAGC GGTGCCCTGG TGCGACGATG GGTTTTGGCT GCTGAACGCC
GACGAGGAAA CCATGCGGCT CGGCAACGCA CTGGAGCACC TGAGCGGCCT GTTCTACATT
CAGGAAGCCA GTTCGATGTT GCCGGTCAGC GCGTTGTTGC TGGGGAATGA TACCCCGGAG
CGGGTACTGG ACATGGCCGC CGCCCCCGGT TCCAAAACTA CCCAGATCGC CGCCCGGCTC
CACAATCAGG GTGTGATTAT CGCTAACGAA TACTCCGCCA GTCGGGTGAA GGTGTTGCAC
GCCAACCTGC ACCGCTGCGG CGTCAGCAAC ACGGCGCTGA CGCACTTTGA CGGCCGGGTC
TTCGGCAGTG CCTTGCCGGA AACCTTTGAT GCCATTCTGC TGGATGCGCC CTGCTCCGGA
GAAGGTGTGG TCAGGAAAGA TCCCGCTGCC ATGAGTCACT GGTCGCTGGA GAGCATCGCC
GATATCGCCG CCACCCAGCG CGAGCTGATC CTCAGCGCCT TCCATGCGCT GAAGCCGGGC
GGCGTACTGA TTTACTCCAC CTGTACCCTC AATCATCAGG AAAACCAGCA GGTTTGTCGC
TGGCTGATGC AACAATTCCC AGATGCATGT GAAATCGAAT CACTGAAAGA CCTGTTCCCA
CACGCTCACC GCGCCCTCAC CGAAGACGGT TTCTTGCATG TCTTCCCGCA AATTTACGAC
AGCGAAGGTT TTTTTGTGGC CCGCTTGCGT AAAACCGCCG GCGTACCGCC ACTGGCAGCG
CCGGATTACA AACTCGGCAA GCTGCCCTTT ACGCCGCTCA ACCACAAGGA TGCGCAGTTG
ATTCGCCAGA ACGCCCAGCG GCTCGGCCTG CAGTGGTCAG AACAGCAGTT ACAGTTGTGG
CAACGGGACG ATGAGATCTG GTTGTTTCCG GCTGCACTGC AACCGATGTT GGGCAAAATG
CGCTTCTCCC GAATCGGTAT TAAACTGGCG GAGCGCTTTG CAAAAGGGTA TCGCTGGCAG
CATGAAGCCA TTGTGGCGCT GGGCAATCCT GACAGCCCGA ATGCGTACGC GCTCAGTGCG
GAGCAAGCCG TAGATTGGTT CCGAGGAAAA GACATTTATC CGCCTTCCCC CGTCAGCCAT
GACGACATTC TGTTGACCTG GCAACAGACC ACGCTGGGGC TAACCAAACG CGTCGGTCAG
CGACTGAAAA ATACCCTGCC CCGGGATCGG GTGCGTGATG GCGCCAACCT CATTCTTTCT
GCCGATTAA
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| Protein sequence | MAKPIPASLI PDFLTAMQAI MPAHLSMDDF IDACRRPLRR SLRVNTLKIS VPDFLALVAP
YGWELEAVPW CDDGFWLLNA DEETMRLGNA LEHLSGLFYI QEASSMLPVS ALLLGNDTPE
RVLDMAAAPG SKTTQIAARL HNQGVIIANE YSASRVKVLH ANLHRCGVSN TALTHFDGRV
FGSALPETFD AILLDAPCSG EGVVRKDPAA MSHWSLESIA DIAATQRELI LSAFHALKPG
GVLIYSTCTL NHQENQQVCR WLMQQFPDAC EIESLKDLFP HAHRALTEDG FLHVFPQIYD
SEGFFVARLR KTAGVPPLAA PDYKLGKLPF TPLNHKDAQL IRQNAQRLGL QWSEQQLQLW
QRDDEIWLFP AALQPMLGKM RFSRIGIKLA ERFAKGYRWQ HEAIVALGNP DSPNAYALSA
EQAVDWFRGK DIYPPSPVSH DDILLTWQQT TLGLTKRVGQ RLKNTLPRDR VRDGANLILS
AD
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