Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1823 |
Symbol | |
ID | 8117306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 2084754 |
End bp | 2085959 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644852215 |
Product | Tail Collar domain protein |
Protein accession | YP_003004153 |
Protein GI | 251789432 |
COG category | [R] General function prediction only |
COG ID | [COG5301] Phage-related tail fibre protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.112044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACAA AATACTTTGC TTTACTGACG AATACCGGCG CGGCGAAATT AGCTAACGCC ACGGCGCTGG GTAGCCACCT GGCCATCACG CAAATGGCGG TCGGCGATGG CGGCGGCAGC CTGCCTACTC CGACGCCGGC CCAAACCAAA CTGATCAATG AGAAACGCCG CGCTACGCTC AACGCACTGA GTGTTGACCC TAAAAACCCC AACCAAATCA TTGCCGAGCA GGTTATTCCT GAAAATGAGG GCGGTTGGTG GATCCGTGAA ATCGGTTTGT ATGACAGCGA CGGTGATCTG GTTGCCGTCG CAAACTGCGC CGATACCTAT AAGCCACTGC TACAGGAAGG CTCAGGCCGG GTACAAACCG TACGCATGAT CCTGATTGTC AATAGCGCCG ACGCCGTTAC CCTGAAAATC GACCCAGCTG TGGTACTGGC GACCCGCCAG TATGTCGATG ATACGGCTGT TGAGGTCAAG ACATACGCCG ACAGCCAACT CAACGCACAT GTCGCCGCCG CCAATCCCCA CCCGCAATAT GCTCCACTCA GCAGCCCCGC GCTGACCGGC GTACCTACCG CGCCGACGGC GGCCAACAGC GCGAACTCCA CGCAACTGGC GACCACCGCA TTTGTCAAAA ACACGGCATT GCTTAAAGAA CAAAACGGTG CGGATATCGC GAATAAATCG GCCTTTCTCG CAAACCTGGG TTTAAGCGAC ACGCTGAAAA TCGCGGATAT CGTCGGCATT CCGTTACCCT GGCCGCAAGC CACACCGCCC GCCGGCTGGC TGAAATGCAA CGGTCAGGCG TTCGACAAAA ACGCCTTCCC GAAACTGGCG CAGGCTTACC CCGGCGGCGT GCTGCCGGAT CTGCGCGGTG AATTTATTCG CGGCTGGGAT GATGGGCGCG GGGTGGATGT TGCCCGTGAA TTGCTAAGTT GGCAAAAAGG AACTCTGACT ATTTCAGATC CCAACTTAAG TGCAGTAAAT GTAGGGGCAT TGATACATGC AAACAACGAT AGTGCCAATA CATACAAATC TATGGGGTTT GATATTGTCA ACAAAAGCGA TTATGCCATG CTACGTGCCG CTATAAATGT GGAGACGGTG GGGGCACAAG ATTTGGATTC AAATGGTTGG CAGTTTGGTT ATGGAGCTAC CCGCCCCCGC AATATCGCCT TTAACTACAT CGTCAGAGCA GCCTGA
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Protein sequence | MSTKYFALLT NTGAAKLANA TALGSHLAIT QMAVGDGGGS LPTPTPAQTK LINEKRRATL NALSVDPKNP NQIIAEQVIP ENEGGWWIRE IGLYDSDGDL VAVANCADTY KPLLQEGSGR VQTVRMILIV NSADAVTLKI DPAVVLATRQ YVDDTAVEVK TYADSQLNAH VAAANPHPQY APLSSPALTG VPTAPTAANS ANSTQLATTA FVKNTALLKE QNGADIANKS AFLANLGLSD TLKIADIVGI PLPWPQATPP AGWLKCNGQA FDKNAFPKLA QAYPGGVLPD LRGEFIRGWD DGRGVDVARE LLSWQKGTLT ISDPNLSAVN VGALIHANND SANTYKSMGF DIVNKSDYAM LRAAINVETV GAQDLDSNGW QFGYGATRPR NIAFNYIVRA A
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