Gene Dd1591_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1793 
Symbol 
ID8117276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2055491 
End bp2056591 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content59% 
IMG OID644852185 
Productcalcium/sodium:proton antiporter 
Protein accessionYP_003004123 
Protein GI251789402 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.102364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACAT CCCCTGACGC GGTGAAAACC CGTCACCACG AATATACTCT GGTTCTTCCA 
CTGCTGGCGC TGTTGGCGCT GGCATTATGG GGCGATGCCC GTAGCCTGCC TGCTATGGTC
GGGATCAATC TGCTGGCGCT GGTGGGGATT CTCGCCAGCG CATTCAGCGT TGTACGTCAC
GCCGATGTAC TGGCGCACCG CCTGGGGGAA CCTTATGGCT CGCTGATCCT CAGCCTGTCG
GTCGTCATTC TGGAGGTGAG CCTGATTTCA GCGCTGATGG CCACCGGCGA TGCCGGCCCG
ACGCTGATGC GCGATACCCT CTACTCCATC ATCATGATCG TCAGCGGCGG TCTGGTCGGT
TTTGCCTTGT TGTTGGGCGG GCGCAAGTTC GCCACCCAAT ACGTTAATCT GGGCGGTATC
AAGCAATACC TGATGGCGAT CTTTCCGCTG GCGGTGCTGG TGCTGGTCTT TCCGGCGGCC
TTGCCGGGCG GCAATTTTTC TGTCGCACAA TCCATCATCA TCGCGCTGAT TTCAGCCATG
ATGTATGGGG TATTCCTGCT GATTCAGACC CGTACGCATC AGAATCTGTT CGTCTACGAG
CACGAAGACG ACGGCGACGA CGGCGACCCA CACCACGGCA AACCCTCGGC GCACAGCTCC
GCCTGGCATT CCATCTGGCT GTTGATTCAT CTGGCGGCCG TGATTAGCGT CACCAAAACG
GACTCCCCGC AACTGGAAGG TTTGCTGGAG GCGATGAATG CACCTTCGCA ATTTACCGGT
TTCCTGGTGG CGCTGCTCAT CTTGTCGCCG GAGGGGCTGG GCGCCATCAC CGCCGTGCTG
CGCAATCAGG TGCAGCGCGC CATGAATCTG TTTTTCGGCT CGGTGCTGGC CACCATTTCG
CTGACGGTTC CTGCCGTGAC GCTGATCGCC ACGCTCACCG GCAGGACGCT GGATTTCGCA
CTCGACTTAC CGCACATCGT GGTGATGTTA TCGGTGCTGA TATTGTGCCA GATTTCATTT
TCTACCGGCC GTACCAACGT GCTTAACGGC AGTGCGCATC TGGCGCTGTT CGCGGCTTAC
CTGATGACCA TCATGCTGTA A
 
Protein sequence
MPTSPDAVKT RHHEYTLVLP LLALLALALW GDARSLPAMV GINLLALVGI LASAFSVVRH 
ADVLAHRLGE PYGSLILSLS VVILEVSLIS ALMATGDAGP TLMRDTLYSI IMIVSGGLVG
FALLLGGRKF ATQYVNLGGI KQYLMAIFPL AVLVLVFPAA LPGGNFSVAQ SIIIALISAM
MYGVFLLIQT RTHQNLFVYE HEDDGDDGDP HHGKPSAHSS AWHSIWLLIH LAAVISVTKT
DSPQLEGLLE AMNAPSQFTG FLVALLILSP EGLGAITAVL RNQVQRAMNL FFGSVLATIS
LTVPAVTLIA TLTGRTLDFA LDLPHIVVML SVLILCQISF STGRTNVLNG SAHLALFAAY
LMTIML