| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1783 |
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| Symbol | |
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| ID | 8116866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 2042584 |
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| End bp | 2046471 |
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| Gene Length | 3888 bp |
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| Protein Length | 1295 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644852176 |
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| Product | ATP-dependent RNA helicase HrpA |
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| Protein accession | YP_003004114 |
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| Protein GI | 251789393 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACATCAC CTCTCCATGC GTTAGAACCT CAGCTCGATG CGTTAATGCT GCGCGACCGG
CAACGTCTGC GCCGTCGTCT GCAGGGCGCG ATGAAAGTGG GGAATCCACA GGCACAGGTT
GCGATTGCGC AGGAGATCGG GCAGGAGATC GACGCGGCTC GCCTGCGGGT GGAACAGCGC
AGAACATCGT TGCCGGCCAT TCGCTATCCG GAGGCGTTGC CGGTCAGCCA GAAACGTGAA
GCGATTCTGA CGGCTATCCG CGACCATCAG GTGGTGATTG TGGCCGGGGA AACGGGCTCC
GGTAAAACCA CTCAGTTGCC GAAGATGTGC CTGGAACTGG GGCGCGGCGT TACCGGCCTG
ATCGGTCACA CCCAGCCGCG CCGGCTGGCG GCGCGCAGCG TGGCGGACCG TATCGCCGCG
GAGCTGGAAA CCTCGCTGGG CAGCACGGTG GGTTACAAGG TGCGATTCAA TGATCAGGTG
GGCGACAACA CGCTGGTCAA ACTGATGACC GACGGTATTT TGCTGGCGGA GATTCAGCAA
GACCGGCTGC TGATGCAGTA CGACACGCTG ATTATCGACG AAGCCCACGA ACGCAGCCTC
AATATCGACT TTATTCTCGG CTACCTCAAA CAGCTGCTGC CAAGACGCCC GGATCTGAAA
GTGATCATTA CGTCGGCCAC CATCGACCCG CAGCGTTTTT CTCGTCACTT CGGCAATGCG
CCGATCATTG AAGTATCCGG CCGAACCTAC CCGGTGGACG TGCGTTATCG GCCGGTGGTG
GAAGAGGCGC AGGACAGCGA CCGCGACCAG TTGCAGGCGA TTCTGGATGC GGTGGACGAG
CTGTGCCACG AAGGGCCGGG CGATATTCTG GTGTTTATGA GCGGCGAGCG GGAAATCCGC
GATACGGCTG ATGCGTTAAG CAAGCAGGAT TTGCCGCACA CCGAGATTTT GCCGCTGTAT
GCGCGGCTCT CCAGTCAAGA ACAAAACCGG GTATTCCACT CTCATCACGG GCGGCGCATC
GTGCTGGCGA CCAACGTAGC GGAAACGTCG CTGACGGTGC CCGGCATCCG GTATGTGATC
GACCCCGGCA CGGCGCGCAT CAGCCGCTAC AGCTATCGCA CCAAGGTACA ACGGTTGCCG
ATCGAGCCGG TGTCGCAGGC TTCCGCCAAC CAGCGTAAAG GGCGTTGTGG TCGTGTGGCG
GCGGGGATTT GTATCCGCCT CTATTCCGAG CAGGATTTTC TCTCCCGGCC TGAATTTACC
GACCCGGAAA TTTTGCGCAC CAACCTGGCG TCGGTCATTT TGCAGATGAC GGCGTTGGGG
TTGGGCGACA TCGCGGCGTT TCCGTTCGTC GAAGCGCCGG ACAAACGCAA TATTCAGGAC
GGGGTGCGGT TACTGGAAGA GTTGGGGGCG ATTGAAACCA GCGATGACGG CCGCTATCGG
CTGACGCCGC AAGGGCGCCA ACTGGCGCAA CTGCCGGTCG ACCCGCGACT GGCGCGCATG
GTGCTTGAAG CGCGGCAAAC CAGCTGTGTG CGTGAAGCGA TGATCATTAC CGCCGCTTTG
TCGATTCAGG ACCCGCGCGA GCGTCCGACG GAGAAAAAGC AGGCGGCGGA GGAAAAACAT
CGCCGCTTTG CCGACAAAGA GTCCGATTTT CTGGCGTTCG TCAACCTGTG GGATTACCTG
CAAGAGCAGC AGAAAGCGTT GTCGTCCAGC CAGTTTCGCA AGCTATGTCG CAGTGATTAT
CTCAACTACC TGCGGGTGCG GGAATGGCAG GATATCTACA CCCAATTGCG CCAGGTGGTA
AAAGAGCTGG GCTTCCCGGT TAACAGCGAA CCGGCGGATT ACCGCAGTTT GCACTGCGCA
CTGTTGACCG GTCTGTTGTC TCACATTGGA CAAAAGGACG TCGAAAAGCA GGAATTCAGC
GGCGCGCGCA ACACCCGGTT TGCGATTTTT CCCGGCTCCG GCTTGTTCAA GAAACCGCCG
AAGTGGGCCA TGGTCGCTGA ACTGGTGGAA ACCAGCCGCT TGTGGGGGCG CATCGCCGCA
CGCATCGAAC CGGAATGGGT CGAGCCGCTG GCGCAGCATT TGATCAAACG CAGTTACAGC
GACCCGCATT GGGAGAAAGC GCAAGGCGCG GTGATGGCGC AGGAGAAGGT CACGTTGTAC
GGTTTGCCGC TGGTGGCGGC CCGCAAAGTG AACTATGGCG CTATCGACCC GGTGGTGTCG
CGCGAGCTGT TTATTCGTCA TGCGCTGGTG GAGGGTGACT GGCAAACCCC ACATGCGTTT
TTCCGTGATA ATCAGAAATT ACGCTCGGAA GTGGAGGAAC TGGAGAACAA GTCCCGCCGC
CGCGATATTC TGGTCGATGA CGAGACCTTG TTTGCGTTCT ACGACCAGCG CTTGCCCCAC
GATGTGGTCT CGAGCCGCCA TTTCGATAGC TGGTGGAAAC AGGCCGCCAA AGCCAATCCG
GAGTTGCTGA ACTTCGAAAA GGCCATGCTG ATCAAAGACG GGGCGGAGCG CGTCAGCGCG
TTGGATTACC CGAACCACTG GCAGCAGGGT GAGCTGCGTT TGCGGCTGAC GTACCAGTTC
GAGCCGGGGG CGGATGCCGA CGGCGTAACC GTGCATATCC CGTTACCGGT ATTGAATCAG
GTAAAAGAAG AGGGATTCGA CTGGCAGATT CCGGGGCTGC GTCGTGACCT GGTGGTGGCG
TTGATCAAAT CATTGCCGAA GCCGATACGG CGTAACTTCG TGCCGGCACC CAATTATGCA
GAAGCGTTTC TGGCGCGGGT CACGCCACGG GAAAAAGGGC TGTTGGAGGC GCTGGAGCGT
GAGCTACGCC TGATGACCGG CGTGACGGTC GATCGTGAAG CCTGGCAGTG GGATCAGGTG
CCCGATCACC TGAAAATGAC CTTCCGGGTG GTGGATGAGA AAAACCGCGC GTTGCGGGAA
GGGAAAGATC TGCGGGCGCT GAAAGAGCAA TTGCAGGAAA AGGTGCAACA AACGCTGTCG
GCGGTGGCGG ATGACGGCAT CGAACAGCGT GATCTACACA TCTGGAGTTT TGGCGACTTA
CCCGAGCGTT ACGAGCAGAA GCGCGGCGGC TACGCGGTAA AAGCCTATCC GGCGTTGGTG
GATGAGAAAG ACAGCGTGGC GATCCGTCTG TTTGATTCGC CGCATCAGCA ACAACAGATG
ATGTGGCGTG GTCAGCGCCG TTTGCTGTTG CTGAACATTC CTTCACCCAT TAAATACCTG
CATGAAAAAT TGCCGAACAA GGCCAAGCTG GGGCTGTATT TCAACCCTTA CGGCAAGGTG
CTGGAACTGA TCGACGATTG TATCGCCTGC GGTGTGGACA AACTGATGGA ACAAGCCGGC
GGCCCGGCGT GGCAAGAGGC GGCATTCCGC CAGTTGCACG AGCGGGTGCG TGCGGGACTG
AACGACACGG TAGTGGATAT TGCCCGTCAG GTAGAGCAGA TTTTAACCGC GGTATTCAAC
ATCAATAAAC GGCTTAAAGG CCGGGTGGAT ATGGCGTTGG CGCTGGCTTT AAGCGACATC
AAAAGCCAGA TGAGCGGGCT GGTGTTCCGT GGGTTCGTCA CCGACAACGG CTACAAGCGG
TTGCCAGATG TGCTGCGCTA TTTGAACGCT ATCGAACGCC GGTTGGATAA ACTGGCGCAG
GATGTCCACC GCGATAGGGC GCAGATGCTG AAAGTGGAGC AGGTGCAGCA GGCCTGGCAA
CAGTGGCTGA ACAAGCTGCC GCCGGAGCGG CGCGACGATG ACGACGTAAA AACCCTCCGC
TGGATGATTG AAGAGTTGCG CGTCAGTTAT TTCGCCCAGC AATTGGGCAC GCCGTATCCC
ATTTCCGATA AACGTATTTT GCAGGCGATG GCACAGATTG ACGGATAA
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| Protein sequence | MTSPLHALEP QLDALMLRDR QRLRRRLQGA MKVGNPQAQV AIAQEIGQEI DAARLRVEQR
RTSLPAIRYP EALPVSQKRE AILTAIRDHQ VVIVAGETGS GKTTQLPKMC LELGRGVTGL
IGHTQPRRLA ARSVADRIAA ELETSLGSTV GYKVRFNDQV GDNTLVKLMT DGILLAEIQQ
DRLLMQYDTL IIDEAHERSL NIDFILGYLK QLLPRRPDLK VIITSATIDP QRFSRHFGNA
PIIEVSGRTY PVDVRYRPVV EEAQDSDRDQ LQAILDAVDE LCHEGPGDIL VFMSGEREIR
DTADALSKQD LPHTEILPLY ARLSSQEQNR VFHSHHGRRI VLATNVAETS LTVPGIRYVI
DPGTARISRY SYRTKVQRLP IEPVSQASAN QRKGRCGRVA AGICIRLYSE QDFLSRPEFT
DPEILRTNLA SVILQMTALG LGDIAAFPFV EAPDKRNIQD GVRLLEELGA IETSDDGRYR
LTPQGRQLAQ LPVDPRLARM VLEARQTSCV REAMIITAAL SIQDPRERPT EKKQAAEEKH
RRFADKESDF LAFVNLWDYL QEQQKALSSS QFRKLCRSDY LNYLRVREWQ DIYTQLRQVV
KELGFPVNSE PADYRSLHCA LLTGLLSHIG QKDVEKQEFS GARNTRFAIF PGSGLFKKPP
KWAMVAELVE TSRLWGRIAA RIEPEWVEPL AQHLIKRSYS DPHWEKAQGA VMAQEKVTLY
GLPLVAARKV NYGAIDPVVS RELFIRHALV EGDWQTPHAF FRDNQKLRSE VEELENKSRR
RDILVDDETL FAFYDQRLPH DVVSSRHFDS WWKQAAKANP ELLNFEKAML IKDGAERVSA
LDYPNHWQQG ELRLRLTYQF EPGADADGVT VHIPLPVLNQ VKEEGFDWQI PGLRRDLVVA
LIKSLPKPIR RNFVPAPNYA EAFLARVTPR EKGLLEALER ELRLMTGVTV DREAWQWDQV
PDHLKMTFRV VDEKNRALRE GKDLRALKEQ LQEKVQQTLS AVADDGIEQR DLHIWSFGDL
PERYEQKRGG YAVKAYPALV DEKDSVAIRL FDSPHQQQQM MWRGQRRLLL LNIPSPIKYL
HEKLPNKAKL GLYFNPYGKV LELIDDCIAC GVDKLMEQAG GPAWQEAAFR QLHERVRAGL
NDTVVDIARQ VEQILTAVFN INKRLKGRVD MALALALSDI KSQMSGLVFR GFVTDNGYKR
LPDVLRYLNA IERRLDKLAQ DVHRDRAQML KVEQVQQAWQ QWLNKLPPER RDDDDVKTLR
WMIEELRVSY FAQQLGTPYP ISDKRILQAM AQIDG
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