| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1766 |
|---|
| Symbol | |
|---|
| ID | 8116849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2021157 |
|---|
| End bp | 2022077 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644852159 |
|---|
| Product | helix-turn-helix domain protein |
|---|
| Protein accession | YP_003004097 |
|---|
| Protein GI | 251789376 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCATGC CGATACCTGA GCCACCGGCG ACTACCCACG TGACAACGCT ACAGCCGGAT
AACCGCAAAC GATTAGGCGC ATTTTTGCGC GCACGACGTG AAAGTCTCGA CCCACTGCGG
CTGGGGTTAT CAATTCCCCG CAAGCGACGC ACGCCGGGGC TACGCCGTGA AGATGTGGCA
CTGCTGGCGG ATGTCGGCAT CACCTGGTAC ACCTGGCTGG AGCAAGGGCG AGAAATCCGC
GCTTCCGCCA AAACATTGAC CGCCATCGCC GACGCTCTGC AATTCAATGA GGCTGAAACC
CGGCATCTGT TTATGCTGGC GGGGCTGCCG TTCTCCCCCG CCGCACAAGC CAGTTGTGAA
AAAATCAGCG CGGACAGCCA ACGCATTCTC GACCAACTCA ATCCTTTCCC GGCGTTGATC
GTCAATGCAC GCGCCAATAT TCTCGGATTT AACCGCGCCT GGAGCCAATT ACTGGATATC
GACCTGCACC AAATCGCCCC GGAAGACCGC AACTGCGTCT GGCTGGCGCT CACCCACCCG
AACTGGCGGG AACGACTGGC GGACCAGCAT GATTTATTGC CGAACCTGGT GGCGATGTTC
CGTGCGCAGA TGACGGAACA CGCGGGTGAC CCGCTGTGGG AAGCGCAACT GCAACGCTAT
CTGAATGCCT CGGAAGAGTT CCGCCAGTTA TGGTACCAGC GTTACGAGAT TCAAGGCGTG
GATGACAAAA TCAAGCATTT TCGTCATCCA ACGCTGGGCG TCTTCACCCT ACGTCAGATC
AACTGGTGGA GTAGCTCCCG CAACGGCGAC CGCCTGCTGG TGTATATGCC GACCAGCGAG
CAGGATAACG CCCTGCTCGC TCAGTTGGCC CAGTTGCCGC CGCCCGGCGA GACGGGCCCG
CTCGCACCAC GCACCCAATG A
|
|---|
| Protein sequence | MVMPIPEPPA TTHVTTLQPD NRKRLGAFLR ARRESLDPLR LGLSIPRKRR TPGLRREDVA
LLADVGITWY TWLEQGREIR ASAKTLTAIA DALQFNEAET RHLFMLAGLP FSPAAQASCE
KISADSQRIL DQLNPFPALI VNARANILGF NRAWSQLLDI DLHQIAPEDR NCVWLALTHP
NWRERLADQH DLLPNLVAMF RAQMTEHAGD PLWEAQLQRY LNASEEFRQL WYQRYEIQGV
DDKIKHFRHP TLGVFTLRQI NWWSSSRNGD RLLVYMPTSE QDNALLAQLA QLPPPGETGP
LAPRTQ
|
|---|
| |