| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1756 |
|---|
| Symbol | |
|---|
| ID | 8116839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 2008896 |
|---|
| End bp | 2009255 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644852149 |
|---|
| Product | DNA-binding transcriptional activator PspC |
|---|
| Protein accession | YP_003004087 |
|---|
| Protein GI | 251789366 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02978] phage shock protein C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCC GTTTTGAGCG AAAACTCTAT CGTTTGCCGG AAGAGGGCAT GATCAAAGGC
GTATGTGCCG GGCTGGCACG CTATTTCGAT GTGCCGGTGA AACTGGTGCG CCTGATCGCG
GTGCTGTCGA TTTTTTTCGG CCTGTTCCTG ATTACCGTCA TCGCCTATAT TGTGCTCTGT
TTTGCGATGG ACCCGGCCCC GCCGGAGGCG TATCAGACGG CTAACGCCGA GGTATCTTCA
CACGCCTTGT TGGATCACGC CGACGCAATA TTAAGCGACA GCGAACAACG GTTGCGACAC
ATTGAACGCT ATATCACATC GGACACCTAC GGCGTGCGCA ATAAGTTTCG CCAGCTGTAA
|
|---|
| Protein sequence | MNTRFERKLY RLPEEGMIKG VCAGLARYFD VPVKLVRLIA VLSIFFGLFL ITVIAYIVLC
FAMDPAPPEA YQTANAEVSS HALLDHADAI LSDSEQRLRH IERYITSDTY GVRNKFRQL
|
|---|
| |