Gene Dd1591_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1723 
Symbol 
ID8116806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1972020 
End bp1972487 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content56% 
IMG OID644852116 
Product17 kDa surface antigen 
Protein accessionYP_003004054 
Protein GI251789333 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00134301 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAC GTTTTCTCGT GATCACTTTA GCCGGTATCA CACTGGCTGG TTGCGCCAAT 
ACCAGCACCC TGTCAGGAGA CGTTTACAGT GCATCCGAGG CCAAGCAAGT TCAAACCGTA
ACTTATGGTA CCGTCGTCTC CACTCGCCCG GTGCAAATCC AGGCAGGAGA AGAAAATAAT
GTCATCGGCA CTATCGGTGG CGCCGTACTG GGGGGATTGG TGGGTAACAC CGTCGGTCGC
GGTACTGGCC GCAATCTGGC AACCGCAGCC GGCGCAGTGG CGGGCGGCGT TGCCGGCAAC
AGTATCGAAG GTGCGGTTAA CCGCGTTCAG GGTGTTGAGC TGGAAATCCG TAAAGACGAC
GGCAGCACTA TCATGGTGGT ACAAAAACAA GGCGATACTA AATTCCACGC AGGTCAACGT
GTAGCGATGG CCAGCAATGG CCGCGCCATC ACCGTATCTC CTCGTTAA
 
Protein sequence
MMKRFLVITL AGITLAGCAN TSTLSGDVYS ASEAKQVQTV TYGTVVSTRP VQIQAGEENN 
VIGTIGGAVL GGLVGNTVGR GTGRNLATAA GAVAGGVAGN SIEGAVNRVQ GVELEIRKDD
GSTIMVVQKQ GDTKFHAGQR VAMASNGRAI TVSPR