| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1719 |
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| Symbol | |
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| ID | 8116802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 1969261 |
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| End bp | 1969941 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644852113 |
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| Product | ribonuclease T |
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| Protein accession | YP_003004051 |
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| Protein GI | 251789330 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00130888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAA AAAATAACCT GAACGCGCTG AATGCGCGTT TTCGGGGCTT TTACCCTGTT
GTTATTGATG TAGAGACCGC TGGGTTCAAC GCAAAAACCG ATGCGCTGCT GGAAATTGCA
GCCGTAACGC TGAAAATGGA TGAAAGCGGT TGGTTACAGC CGGACGCCAC CTTACATTTT
CACATCGAAC CTTTTGAAGG CGCTATTTTG CGGCCCGAAG CGCTTGCCTT CAACGGCATC
GACCCGACCA ATCCGCTACG CGGCGCAGTG AGTGAATATG AAGCGCTGCA TGAAATCTTC
AAGTCGGTAC GCAAGGGCAT CAAGGAACAG GACTGCAATC GCGCTATCAT CGTGGCGCAC
AACGCCACCT TCGATCATAG TTTCCTGATG GCGGCGGCAG AGCGCTGCGG CCTGAAGCGC
AATCCGTTCC ATCCTTTCGC CACTTTTGAT ACGGCGGCGC TAAGCGGATT AGTACTGGGG
CAGACCGTGC TGGCTAAAGC GTGTATCGCA GCAGATATTC CCTTCGATGC CAGTCAGGCT
CATTCAGCAC TCTATGACAC CGAACGAACG GCGCAACTAT TTTGTGAACT GGTTAATCGT
TGGAAGCGTA TGGGCGGCTG GCCGCTCGCC TCTGGCATTG ATACGAATAC CGAAGCATCG
CTGACCGACG ACGACGAGTA A
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| Protein sequence | MAEKNNLNAL NARFRGFYPV VIDVETAGFN AKTDALLEIA AVTLKMDESG WLQPDATLHF
HIEPFEGAIL RPEALAFNGI DPTNPLRGAV SEYEALHEIF KSVRKGIKEQ DCNRAIIVAH
NATFDHSFLM AAAERCGLKR NPFHPFATFD TAALSGLVLG QTVLAKACIA ADIPFDASQA
HSALYDTERT AQLFCELVNR WKRMGGWPLA SGIDTNTEAS LTDDDE
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