| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1717 |
|---|
| Symbol | |
|---|
| ID | 8116800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 1967504 |
|---|
| End bp | 1968478 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644852111 |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_003004049 |
|---|
| Protein GI | 251789328 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00794283 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTAT TTATTACGCT CTTTTTATTA TTTTTCAGTA ATTTGTTTGC GAATCTGGCG
CTGGCTAATC CGCATGGCGC GTCCGCGTTG CCGCGTAAAT CGGGTGTAGA AACGGCAAAC
AAAGCGCTTG ATGAGTCCAA AAAAAATAAG GTCGCCAAAA ATGCCAATAA AAAAGGCACG
GCGCCCTCGC ATGACAAAAA ACCTGAAAAG ACGACCAAAA ACGCGCCGGC GGAAACAACA
TCATCCGCTC ATGATAAAAG CGCCAAATCT GGTGATAAAA AACCGGTGAC GGCAGCGGCT
TCAACCCACG CTACCGGTAA ACCACAGAAG CAGGAAAAAA GCCCGCCGAC TAAAGCGGCA
GCCAGCAAAA CGACGAAAAA AGAGCTGCCT GCTACGGCCA GAAATAACCG TAATGCGCAT
GAATCGGTGA TAGCCAAACA CACATCCAAA AAAGGCAAAA CGGTCATCGC CGAAGAAGAT
ATCGCCCCGG TCTCATCGCA TGGTAAAAAT AAAAAAGGTA AACAAGACAA GGCTGCGCTG
ACTATCAGCG CCGCGCACCA AAAACGTTAT CAACATGCCA AGTTAACCGC GATGAATAAG
CTGATGAGCC AAATCGGCAA GCCTTATCAT TGGGGCGGTT CCACACCGTA TTCGGGTTTT
GATTGCAGCG GACTGGTGTA TTACGCTTAT AAAGATGTGG TGAAAATTCC GATTCCACGC
ACAGCCAATG AAATGTTCCA TTTGCGTGAC GCGGCGCCAA TTAAGAAAAG CGAACTGGAA
AGCGGCGACC TGGTCTTCTT TCGTATCACC AACCGTGGGG CCGCCGATCA TGTGGGCGTC
TACCTGGGCA ACGGCCGATT TATTCAGTCG CCACGCACCG GCGCTGATAT CAAGATCAGT
AAACTGAGTG AAGATTACTG GCAGGATCAT TACGTCGGCG CTCGCCGCGT GGTGACGCCG
AAAACCATTC GTTAG
|
|---|
| Protein sequence | MRLFITLFLL FFSNLFANLA LANPHGASAL PRKSGVETAN KALDESKKNK VAKNANKKGT
APSHDKKPEK TTKNAPAETT SSAHDKSAKS GDKKPVTAAA STHATGKPQK QEKSPPTKAA
ASKTTKKELP ATARNNRNAH ESVIAKHTSK KGKTVIAEED IAPVSSHGKN KKGKQDKAAL
TISAAHQKRY QHAKLTAMNK LMSQIGKPYH WGGSTPYSGF DCSGLVYYAY KDVVKIPIPR
TANEMFHLRD AAPIKKSELE SGDLVFFRIT NRGAADHVGV YLGNGRFIQS PRTGADIKIS
KLSEDYWQDH YVGARRVVTP KTIR
|
|---|
| |