Gene Dd1591_1704 details

Gene Information

• Locus tag: Dd1591_1704
• ID: 8117905
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 1951078
• End bp: 1952988
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 644852096
• Product: PTS system beta-glucoside-specific transporter subunits IIABC
• Protein accession: YP_003004036
• Protein GI: 251789315
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
• TIGRFAM ID: [TIGR00826] PTS system, glucose-like IIB component; [TIGR00830] PTS system, glucose subfamily, IIA component; [TIGR01995] PTS system, beta-glucoside-specific IIABC component

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.13733
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTACG AAACATTAGC CAGTGAAATA AGAGATGGCG TAGGCGGCCA GGAAAATATT 
ATTAGCGTGA TACATTGCGC TACACGCCTG CGGTTTAAAT TGAAAGATAA TGCCGCCGCC 
CATGCTGATG TCCTGAAAAA TAATCCCGGC ATTATTATGG TGGTGGAAAG CGGTGGTCAG 
TTTCAGGTGG TGGTAGGAAA TCAGGTTGCA GACGTTTATC AGGCGTTGCT TTCACTCGAC 
GGTATGGCCC GTTTTAATGA CACGGCAGCA TCAGAAGAGA AAAAAGAAAG CTTTTTTGCC 
GGATTTATCG ACATTATTTC CAGTATTTTT ACTCCGTTTG TCGGTGTGAT GGCCGCGACA 
GGTATTCTGA AAGGTTTTCT GGCGTTAGGG GTCGCCACCC ATTTTATAAC GGAAAGCAGC 
GGCACCTATA AATTATTATT TGCCGCCAGC GATGCGTTAT TCTATTTTTT CCCGATTGTG 
CTGGGTTATA CGGCCGGCAA GAAATTCGGC GGTAACCCGT TTACTACGCT GGTTATCGGC 
GCCACATTGG TCCATCCCAG CATGGTCGCT ACCTTTAACG CCATGCAGGC GCCGGATCAC 
CCCACACTCC ATTTCCTGGG GATCCCGATT ACGTTTATCA ATTACAGCTC CTCGGTAATT 
CCGATTCTGT TCGCCAGTTG GGTTTCCTGC AAACTGGAAA AACCGCTGAA TCGTTGGCTG 
CACGCGAATA TCCGTAATTT CTTCACGCCG CTGCTGTGTA TTGTTATTAG CGTTCCGTTG 
ACCTTTCTGC TGATTGGGCC GAGCGCTACC TGGCTGAGCC AGATGCTGTC GGGAGGATAT 
CAATGGTTAT ATGGATTGAA CTCGTTGCTG GCTGGCGCCG TGATGGGCGC ACTGTGGCAG 
GTTTGCGTGA TTTTCGGCCT GCATTGGGGA TTCGTACCGT TAATGCTCAA CAACCTGAGT 
GTAATGGGGC ATGACACCCT GCTGCCGTTG CTGACCCCAG CGGTGTTGGG GCAGGCCGGC 
GCCACCCTGG GCGTGCTGCT GCGTACCCGG GACATGAAAC GGAAAGGGAT TGCCGGGTCG 
GCGTTTTCCG CGGCGCTTTT CGGTATTACC GAACCGTCGG TATACGGCGT GACATTGCCG 
CTGCGTCGCC CCTTTATCTT TGGCTGTATC GGCGGCGCGA TAGGGGCGGC GGTGATGGGG 
TATTTCCATA CCACCATCTA TTCGTTTGGT TTTCCCAGCA TTTTCACCTT CACCCAAATC 
ATTCCGCCGA CCGGCGTAGA CAACAGCGTC TGGGCGGCTG TCATCGGCAC ACTGGCGGCG 
TTTGTTTTCG CCGCTGCGGC CAGTTGGTCG TTCGGCGTGC CTAAAGACGA AACGCAGCCT 
GCTGTGCAGG AGAGCTCACC CACGGCGGCA ACGACGCCGA ACGGCACGAA TGCCGTTCAT 
GACGAAACGA CGATCCGTGA TGAGACGCTG TTTAGCCCGC TCTTCGGCGA GGTGGTGCCG 
CTAGAGCAAG TGGCTGATCG TACCTTTGCC AGCGGCGTGA TGGGGAAAGG GATCGCTGTC 
CGGCCTTCAG AGGGATGCTT GTATTCTCCG GTGGACGGCA CCGTTGCCTC GCTGTTTAAG 
ACGCATCACG CAATTGGCCT GGCATCGCGG GGCGGTGCAG AAGTGTTGAT ACACGTGGGT 
ATCGATACCG TCCGGTTGGA TGGACGCCAT TTTACCCCAC ATGTGCGTGT CGGCGATGTG 
GTGCGCCAGG GAGACCTGCT GCTGGAGTTC GATGCACCGG CGATCGAGGC GGCGGGATAC 
GATCTCACGA CCCCGATTGT CATTACCAAT AGTGAAGACT ATCGCGGGGT TGAGTCTGTC 
GCCGGCGGTA GGGTTGATGC GAATACGCCG CTGACACGGC TGGTATGTTG A 

 

Protein sequence

MNYETLASEI RDGVGGQENI ISVIHCATRL RFKLKDNAAA HADVLKNNPG IIMVVESGGQ 
FQVVVGNQVA DVYQALLSLD GMARFNDTAA SEEKKESFFA GFIDIISSIF TPFVGVMAAT 
GILKGFLALG VATHFITESS GTYKLLFAAS DALFYFFPIV LGYTAGKKFG GNPFTTLVIG 
ATLVHPSMVA TFNAMQAPDH PTLHFLGIPI TFINYSSSVI PILFASWVSC KLEKPLNRWL 
HANIRNFFTP LLCIVISVPL TFLLIGPSAT WLSQMLSGGY QWLYGLNSLL AGAVMGALWQ 
VCVIFGLHWG FVPLMLNNLS VMGHDTLLPL LTPAVLGQAG ATLGVLLRTR DMKRKGIAGS 
AFSAALFGIT EPSVYGVTLP LRRPFIFGCI GGAIGAAVMG YFHTTIYSFG FPSIFTFTQI 
IPPTGVDNSV WAAVIGTLAA FVFAAAASWS FGVPKDETQP AVQESSPTAA TTPNGTNAVH 
DETTIRDETL FSPLFGEVVP LEQVADRTFA SGVMGKGIAV RPSEGCLYSP VDGTVASLFK 
THHAIGLASR GGAEVLIHVG IDTVRLDGRH FTPHVRVGDV VRQGDLLLEF DAPAIEAAGY 
DLTTPIVITN SEDYRGVESV AGGRVDANTP LTRLVC