| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1648 |
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| Symbol | |
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| ID | 8117849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 1878462 |
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| End bp | 1879667 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644852040 |
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| Product | outer membrane-specific lipoprotein transporter subunit LolC |
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| Protein accession | YP_003003980 |
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| Protein GI | 251789259 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAAC CTGTCGCACT TTTTATTGGC CTGCGTTATA TGCGAGGGCG GGCCGCGGAC
CGCTTTGGGC GGTTTGTTTC CTGGTTATCC GCTATTGGTA TCACCCTCGG CGTGATGGCG
TTGGTTACCG TGCTGTCGGT AATGAACGGT TTTGAGCGGG AACTGGAAAA CAGCATTCTG
GGGCTGATGC CTCAGGCCCT GATCACGACG CCGCAAGGCT CCCTTAATCC ACAGACGTTA
CCGGCCTCTT CGCTCTCTGC GCTGAAGGGC GTGAACCGTA TCGCGCCGCT CACGACCGGC
GATGTCGTGC TGCAAAGCGC CCGCAGCGTG GCGGTGGGGG TGATGCTCGG TATCAATCCG
GACGAGCAGG AACCGCTGGC GAGTTATTTG ACCAAGGCGG CGTCGCTACA GCAACTGCAG
CCGAGTCAAT ATCAGGTGAT TCTCGGTGAG CAACTGGCCA ACCAGCTCGG CGTCAAGCCG
GGCGATCACG TGCGATTGAT GGTGACCGGC GCCAGCCAGT TGACGCCGAT GGGACGTGTG
CCGAGCCAAC GGTTGTTTAC CGTCGCCGGG ACGTTTTACG CCCACAGCGA AGTGGATGGT
TATCAACTGT TGGTTAACCA GCAGGATGCG TCGCGCCTGA TGCGCTATGC GCCCGGCAGC
ATCACCGGCT GGCGGCTGTG GCTTGACCAA CCGCTGACGG TGGATACGCT GAGTCAGCAG
GCGTTGCCGG CAGGGACGGC ATGGAAAGAC TGGCGTGAGC GCAAAGGCGA GTTGTTCCAG
GCGGTCCGGA TGGAGAAAAA CATGATGGGG CTGTTATTGA GCCTGATTGT GGCTGTCGCC
GCGTTCAATA TCATTACTTC ACTGGGTTTG CTGGTGATGG AAAAACAGGG CGAAGTCGCG
ATTTTGCAGA CGCAAGGACT CACCCAGCGG CAGATCATGG CGGTCTTTAT GGTTCAGGGC
GGCGGCGCCG GTGTGGTGGG GGCGTTGGTC GGCGCGATAC TGGGTATGGT GCTGGCCAGC
CAGTTGAATA CCCTGATACC GATGCTGGGG TTGTTGATTG ACGGTGGCGC GCTGCCGGTA
CAGATTCAGC CGTTGCAGGT GATCGCGATT GCGCTGGTGG CGATGCTGCT GGCGCTGCTT
TCCACGCTTT ATCCTTCCTG GCGCGCGGCC GCCACCCATC CCGCAGAGGC TTTACGTTAT
GAGTAA
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| Protein sequence | MYQPVALFIG LRYMRGRAAD RFGRFVSWLS AIGITLGVMA LVTVLSVMNG FERELENSIL
GLMPQALITT PQGSLNPQTL PASSLSALKG VNRIAPLTTG DVVLQSARSV AVGVMLGINP
DEQEPLASYL TKAASLQQLQ PSQYQVILGE QLANQLGVKP GDHVRLMVTG ASQLTPMGRV
PSQRLFTVAG TFYAHSEVDG YQLLVNQQDA SRLMRYAPGS ITGWRLWLDQ PLTVDTLSQQ
ALPAGTAWKD WRERKGELFQ AVRMEKNMMG LLLSLIVAVA AFNIITSLGL LVMEKQGEVA
ILQTQGLTQR QIMAVFMVQG GGAGVVGALV GAILGMVLAS QLNTLIPMLG LLIDGGALPV
QIQPLQVIAI ALVAMLLALL STLYPSWRAA ATHPAEALRY E
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