Gene Dd1591_1636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1636 
Symbol 
ID8117837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1859990 
End bp1860862 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content62% 
IMG OID644852028 
ProductThiamine kinase 
Protein accessionYP_003003968 
Protein GI251789247 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0510] Predicted choline kinase involved in LPS biosynthesis 
TIGRFAM ID[TIGR02721] thiamine kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00206508 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACGGT TCGCCAGCAG TGATGCGCTA AGCGCGCTGC TACAGCAGGT TCTGCCGGCG 
GTAGCAACCG CCGGTTTTCA TTTACAGCCG GTCTCCGGGC TGAGCCACCA GAGCTGGCGC
GTACATTCTC CGGCCGGGCT GTGGCTGGCG CGTGGAGAAA CGCCGCAGGG GCGACAGTTG
GGGACGTCCC GGCAGCGTGA GTTTCATGTG CTGCGTAAAT TGCGCGGGCA GTCGTTGGCG
CCTCATCCGG TGTGCTGGCG TGATGGCTGG TTATTGGTGC CATGGTTGGC GGGCGAACCC
GCCGATGCCG CGCAATTTTC GGCGGCGCTG GCGCAAGGGC AGTTGGCGGC GTTAATGGCG
CGCCTGCACC ATCTGCCGCG TTATGGCTAT CCGCTACCCT TGAAACGCCT GATAGCGCGC
CACTGGCAGA ATATGGACCC GACCCGACGT GCGCCGAGGC TGCAGCGCGC CTGCCGGCGA
CTTATCGATA AACCGTTGCC GCCGCCGCTA TTGATTGCGC CGCTTCATCT GGATGTACAT
CCCGGCAATC TGCTGCGTAC CGATAACGGC TGGCGGCTGA TTGACTGGGA ATATGCGGCG
GATGGCGATA TCGCGCTGGA GCTGGCGTTG CTGTTTCGGA GCGGTGAACT CAATGACGCA
CAGCAACAGG ATTTTTTACA CGCTTACTGC CGGCACTGGC GCGGCATGTG CCCGGCATCA
TTGCGGCGAC AGGTGGCGCA CTGGCAATAT TGGGCGGATT ATCTGGTGTT GATGTGGTTC
GAAGTCCGTT GGCGACAGAC CGGCGAAGCG TATTACCGGC AGACGGCCGA TGCGCTGCGT
GGTGCGACAG TGCGTGATAC GACGGAATCG TGA
 
Protein sequence
MVRFASSDAL SALLQQVLPA VATAGFHLQP VSGLSHQSWR VHSPAGLWLA RGETPQGRQL 
GTSRQREFHV LRKLRGQSLA PHPVCWRDGW LLVPWLAGEP ADAAQFSAAL AQGQLAALMA
RLHHLPRYGY PLPLKRLIAR HWQNMDPTRR APRLQRACRR LIDKPLPPPL LIAPLHLDVH
PGNLLRTDNG WRLIDWEYAA DGDIALELAL LFRSGELNDA QQQDFLHAYC RHWRGMCPAS
LRRQVAHWQY WADYLVLMWF EVRWRQTGEA YYRQTADALR GATVRDTTES