Gene Dd1591_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1606 
Symbol 
ID8118127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1832628 
End bp1833548 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content51% 
IMG OID644851999 
Productlipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 
Protein accessionYP_003003939 
Protein GI251789218 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAA TCCCCTCCTT TCATCGCTCA CTACTACACC CACGTTACTG GCCGACATGG 
TTAGGAATTA TTCTGCTCTA TCTGGTGGTA CTACTGCCGT ATCCTCTCAT CTATCGTATC
GGCACCGGCA TGGGCAGGCT GTCTATGCGT ATTCTGAAGC GCCGTGTCGC TATTGCTCAC
CGTAATTTGC AACTTTGCTT CCCGGATATG CCGATTGAAG AACGGGAAAC GCTGGTTAAG
AAAAACTTTG AATCTGTCGG TATGGGCGTC ATGGAAACCG GTATGGCATG GTTCTGGCCA
GACTGGAGAG TAACGCGCTG GTTTACCGTA ATAGGGATCG AAAATATGCA GCCTTTACGT
GAGCAGAAGC GTGGAGTGCT GTTGATTGGC CTACATTTTC TGACGCTGGA GTTAGGGGCT
CGCATTTTCG GTATGCAAAA CGCCGGTATT GGCGTTTATC GCCCCAATGA TAATAAATTA
ATCGACTGGT TGCAGACCTG GGGCAGAATG CGCTCTAACA AATCCATGCT GGATCGCAAA
GACGTAAAAG GCATGATTCG TGCACTGAAA CAGGGTGAAA TCATCTGGTA CGCCCCCGAT
CATGACTATG GCCCACGCAG CAGTGTGTTT GTTCCTTTGT TTGCAGTTAA AAGCGCTGCT
ACCACCGTCG GCAGCTATAT GCTGGCTCGG GCTGCAAAAC CCGCGATTGT GCCGTTCGTT
CCCCGCCGCC GAGCTGATGG GAAGGGTTAT GAATTAATCA TTCGCCCGGC TCAGTTGGAT
ATACCGTTGG AAAATGAGGA AACCGCCGCT GCATGGATGA ATACCCTGGT GGAAGAAAAC
ATCATGCTGG CACCAGACCA ATACATGTGG CTGCATCGGC GTTTCAAAAC ACGCCCTGCC
GGCGAACCCT CACTCTATTA A
 
Protein sequence
MTQIPSFHRS LLHPRYWPTW LGIILLYLVV LLPYPLIYRI GTGMGRLSMR ILKRRVAIAH 
RNLQLCFPDM PIEERETLVK KNFESVGMGV METGMAWFWP DWRVTRWFTV IGIENMQPLR
EQKRGVLLIG LHFLTLELGA RIFGMQNAGI GVYRPNDNKL IDWLQTWGRM RSNKSMLDRK
DVKGMIRALK QGEIIWYAPD HDYGPRSSVF VPLFAVKSAA TTVGSYMLAR AAKPAIVPFV
PRRRADGKGY ELIIRPAQLD IPLENEETAA AWMNTLVEEN IMLAPDQYMW LHRRFKTRPA
GEPSLY