Gene Dd1591_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1580 
Symbol 
ID8118100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1794802 
End bp1796223 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content49% 
IMG OID644851972 
Productflagellar hook-associated 2 domain protein 
Protein accessionYP_003003913 
Protein GI251789192 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACTT CAGTTAGTGC TAACTCAGAT ATTATCTCAT CAATCGGTTT GAACCTGGGG 
TCGACAATTC AGGGGCAATC GCTTGACTTA AGTAACCTTA TAACCAAACT GCAATCTGTC
GAAGAACAAC GATTAACACC TTATACCAAC AAACAAACTT CGCTGAGCGC AAAGGCCACG
GCCTACAGCA CACTCGAGAC AGCGATGAAG GGCCTGCAGA GCGCTACCAC CACGCTGCAG
AACATGAAAA CCATTACCTC GACTGCGGTC ACAAGCACCA ATACCGCATT CAGTGCTAGC
ACGGATAGCA CTGCAGTGGC AGGCTCCTAC AGTGTTTTCG TCAATAATCT CGCGCAAGCC
CAGTCACAAA TATCCGGGGC CTTTAGCAGC GCATCGACCG CACTGGTAGC AGGCGGCACC
TCCAGCACCA GCAGCACGAT TACGATCGCC CAGCCCGGCA AGCCTACGCC AATGACGGTT
ACGCTGACTG ATGACAAAAC ATCATTAAAT GATATCCGTG ATGCTATCAA CAATGCCGGT
GGTAGCGTCA GTGCCAGTAT TATTAATAAC GGCACCAGCA ATTACTTGAT GCTAACGGCA
AAAGATACCG GCACGCAATC GGCGATGACC ATTTCAGTCA GCGGTTCACT TTCCAGTTCG
CTGAGCAGCA GCAGCTTTAG CGAGCAAGTG GCGGCTAAAG ATGCCTCATT TACGCTTAAT
GGTATATCGA TAACCAGCCA GAGCAATACC GTTACTACGG CTGTCACTGG TGTAACACTG
AACCTCAAAT CGGCGTCCAC TGCAGGCTCA ACGGCGGAAA ACCTGACGAT TGCATCCGAT
ATCACCAACA CCAAAAAAGC CGTTCAGGAT TGGGTCACGG CCTACAACAA CGTGCTGGAT
GTGATCAAAA CCCAGACCGA TGCCGGCACT GGTGCGCTGA ATGGTGACAG TACGGTTCGT
ACGATCCAAC AGCAGCTACA AAGCCTGATG ACGAATGTTC AGAGTGGTAG CGGTTCGCTA
CATATCATGC TCGATCTGGG TATTATCCAG GATCCCACTA ATAATGGTAA ACTGAAAATT
GATGATGATG CCAAACTAGA AAGTGCGCTG AGACTCAGTC CCACTAGCGT AACCACATTC
TTCACCGGCG ACGGAACCAC CACAGGATTC GCCACCCAGG CGGGAAATTA CCTGACCAGA
ACAGTAGACT CGTCGGATGG TCTGATAAAA TCGGCCAAGG CAGGCATCGA GACCAGCCAG
AAAAGCTTAG AAACACAGAT CACCAGCATC CAGGACAGTA TTGATGCGAC GATGAAACGT
TATAAAACAC AGTTTTCTCA ACTCAACACT TTGCTGGCCC AAATGACATC AACCAGTAGT
TACCTGACGA AACAGTTTGA TAGCAGTAAT AAATCCAGTT AA
 
Protein sequence
MATSVSANSD IISSIGLNLG STIQGQSLDL SNLITKLQSV EEQRLTPYTN KQTSLSAKAT 
AYSTLETAMK GLQSATTTLQ NMKTITSTAV TSTNTAFSAS TDSTAVAGSY SVFVNNLAQA
QSQISGAFSS ASTALVAGGT SSTSSTITIA QPGKPTPMTV TLTDDKTSLN DIRDAINNAG
GSVSASIINN GTSNYLMLTA KDTGTQSAMT ISVSGSLSSS LSSSSFSEQV AAKDASFTLN
GISITSQSNT VTTAVTGVTL NLKSASTAGS TAENLTIASD ITNTKKAVQD WVTAYNNVLD
VIKTQTDAGT GALNGDSTVR TIQQQLQSLM TNVQSGSGSL HIMLDLGIIQ DPTNNGKLKI
DDDAKLESAL RLSPTSVTTF FTGDGTTTGF ATQAGNYLTR TVDSSDGLIK SAKAGIETSQ
KSLETQITSI QDSIDATMKR YKTQFSQLNT LLAQMTSTSS YLTKQFDSSN KSS