Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1568 |
Symbol | |
ID | 8118088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 1784472 |
End bp | 1784888 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644851960 |
Product | flagellar motor switch protein FliN |
Protein accession | YP_003003901 |
Protein GI | 251789180 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.183846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGACA TCAAGAAACC GTCCGAAGAA ACGGATTCCG TGGACGATCT GTGGGCTGAT GCATTTAACG AGCAGCAGTC GGCAGAAAAA AGTGCCTCGA GCAGCACGGA AGGTATTTTT AAGAACTTTG ATGTGCAAGA CACCCAGGGC TCAATGCAGG ATATCGATCT CATTTTAGAT ATCCCGGTAA AACTGACGGT AGAACTAGGT CGGACCAAAA TGACGATCAA AGAGTTGCTG CGTTTATCGC AAGGCTCTGT GGTCGCATTA GATGGCCTGG CCGGTGAACC GTTGGATATC ATGATTAACG GATATCTGAT TGCTCAGGGC GAAGTCGTGG TCGTTTCTGA CAAATATGGT GTGCGTATTA CTGATATTAT TACGCCGTCA GAACGTATGC GCAGGCTAGG CCGCTAA
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Protein sequence | MSDIKKPSEE TDSVDDLWAD AFNEQQSAEK SASSSTEGIF KNFDVQDTQG SMQDIDLILD IPVKLTVELG RTKMTIKELL RLSQGSVVAL DGLAGEPLDI MINGYLIAQG EVVVVSDKYG VRITDIITPS ERMRRLGR
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