Gene Dd1591_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1568 
Symbol 
ID8118088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1784472 
End bp1784888 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content48% 
IMG OID644851960 
Productflagellar motor switch protein FliN 
Protein accessionYP_003003901 
Protein GI251789180 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.183846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACA TCAAGAAACC GTCCGAAGAA ACGGATTCCG TGGACGATCT GTGGGCTGAT 
GCATTTAACG AGCAGCAGTC GGCAGAAAAA AGTGCCTCGA GCAGCACGGA AGGTATTTTT
AAGAACTTTG ATGTGCAAGA CACCCAGGGC TCAATGCAGG ATATCGATCT CATTTTAGAT
ATCCCGGTAA AACTGACGGT AGAACTAGGT CGGACCAAAA TGACGATCAA AGAGTTGCTG
CGTTTATCGC AAGGCTCTGT GGTCGCATTA GATGGCCTGG CCGGTGAACC GTTGGATATC
ATGATTAACG GATATCTGAT TGCTCAGGGC GAAGTCGTGG TCGTTTCTGA CAAATATGGT
GTGCGTATTA CTGATATTAT TACGCCGTCA GAACGTATGC GCAGGCTAGG CCGCTAA
 
Protein sequence
MSDIKKPSEE TDSVDDLWAD AFNEQQSAEK SASSSTEGIF KNFDVQDTQG SMQDIDLILD 
IPVKLTVELG RTKMTIKELL RLSQGSVVAL DGLAGEPLDI MINGYLIAQG EVVVVSDKYG
VRITDIITPS ERMRRLGR