Gene Dd1591_1562 details

Gene Information

• Locus tag: Dd1591_1562
• ID: 8118082
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 1779172
• End bp: 1781094
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 644851954
• Product: flagellar hook-associated protein FlgK
• Protein accession: YP_003003895
• Protein GI: 251789174
• COG category: [N] Cell motility
• COG ID: [COG1256] Flagellar hook-associated protein
• TIGRFAM ID: [TIGR02492] flagellar hook-associated protein FlgK

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.776714
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAATT TGATTAATAC CGGAATGAGT GGTTTGAGTG CTGCACAAGC AGCGCTGAGC 
ACTGTCAGTA ACAATATCAG TAATCAGGCT GTTGCAGGGT ATAGCCGTCA AAATGCACTG 
TTGGCACAGA ACAACGGCAC CAATGTTTCC GCCGGTTATA TTGGTAATGG TGTTACCGTT 
GTCAGTATCA ATCGTGATTA TAACGACTTT GTTTCCAAAC AATTACGTTC GGCGCAGACA 
ACCAGCAGTT CTACTGCTGC CTATTACGAG CAGATTTCCA AGATCGATAA CCTGTTGTCG 
AGCAGCTCAT CCAGCTTGTC TACCAACATT CAGGATTTCT TCAAAAATTT ACAGAACCTG 
ACCAGTAACT CTAGCGATTC GTCAGTACGC CAAACCGTAC TCGGCAAGGC TAGCGCTTTG 
GTTAACCAGT TCAAGATTAC CGATCAGTAT CTGCGTGATA TGGATACTAA TATTAACGGC 
GAGATTTCCG TCACCGTTTC GCAAATCAAC ACCTACGCCA AGCAGATTGC CGATATCAAC 
GATCAAATCG TCCGTCTGAA AGGCGCTAAT AATGGTGCTT CGCCCAATGA TCTGCTGGAT 
CAGCGCGATA ATCTGGTCAA TGACTTGAAC AAGTTGGTCG GTATCGATGT TGCGGTTCAG 
GACGGCGACG TTTACAACAT CTCGCTGAAG AATGGCCTGA CGCTGGTACA GGGAAAAAAT 
TTCAACACAC TTGCCGCTAC GCCATCCAGC ACTGATCCTA CCCGCACAAC CGTTTCTTAT 
AATGATACGA TTGCTGGCTT AAGCGAAGTG AAGGAGAGTG CGATCACAGG CGGCTCTCTT 
GGCGGTTTAT TAAATTTCCG CACCAGTACG CTGGATAGCG CTCGTAACCA GTTAGGGCAG 
ATGGCGCTGT CATTTGCCGA TGCTTTCAAT CAGCAGCATA AACTCGGGTT CGACTTAAAC 
AATGTACAGG GAGGAGACTT CTTTGGTGTT GGTTCTTCTG TCACATTGAA AAGCGCCAAT 
AATACTTCTG CTGCCGAATT GACTTCTGCA TATTTGAACG ACACATACTC GCTGCAGTAC 
AACGGGACAT CCTGGAGCGT TACCCGCTCG GACGGTACCT CGGCAAGTTC AACCCTCTCC 
GGCTCTGCCT TGACCTTTGA TGGTTTCACT ATCGATATCT CTGGTTCGGC CGCTTCAGGC 
GATACTTTTA GCTTCAAAGT ATCGCCAGGA AAAACGTCAA TTTCGCAGAC CGCACCTACA 
GGGTCTACAT CTGCCGCTTC GCTGACGCGA AATGATAGCA ACTACATCAA GGCGAGTGAT 
TACAACGTCA AATTTGTTGG TCCGTCAGCG AGTGACTGGT CTATCACCCG TTTGTCGGAT 
GGCGCTAACC TGTCTTCCTC TGCGACGTAT ACCGCAGCCA GTGGTTCGAC GCCGGCTAGC 
CTGATTTTTG ATGGGATGAA ACTCGATATT ACAGGAACGC CGGCAGCTAA AGACCTGTTT 
ATGGTCAAGG GCGTTCGCGA TGTTATCGTA GATATGTCGG TGAAAGTAAC GGACTCATCC 
AAGATTGCAG CGGCTGGCGC TCCCTTGACA TCTGCAGGTG GCGGTGTAAG TGATAACACT 
AACGCTAAGG CGTTGTTGAA TCTGCAAACG GCTAAAGTCG TCGAAAACAA ATCTAGCGTT 
AGCCAGGCGT ATGCCAGTTT GGTGGGCGAT ATCGGCAATA AAACCAGTAC GGCTAAGGTT 
ACCGATACAT CCCAGAAGAA TGTCGTGAAG CAGTTGACTA CCGAACAGCA GTCTGTGTCC 
GGCGTCAATC TGGATGAAGA GTACGGTAAT TTGGTGCGTT TTCAGCAGTA TTACATGGCA 
AATGCCAAGG TAATCCAGAC TGCTTCGACT ATCTTTGATG CCCTGTTGGC GATTCGCGGT 
TAA 

 

Protein sequence

MSNLINTGMS GLSAAQAALS TVSNNISNQA VAGYSRQNAL LAQNNGTNVS AGYIGNGVTV 
VSINRDYNDF VSKQLRSAQT TSSSTAAYYE QISKIDNLLS SSSSSLSTNI QDFFKNLQNL 
TSNSSDSSVR QTVLGKASAL VNQFKITDQY LRDMDTNING EISVTVSQIN TYAKQIADIN 
DQIVRLKGAN NGASPNDLLD QRDNLVNDLN KLVGIDVAVQ DGDVYNISLK NGLTLVQGKN 
FNTLAATPSS TDPTRTTVSY NDTIAGLSEV KESAITGGSL GGLLNFRTST LDSARNQLGQ 
MALSFADAFN QQHKLGFDLN NVQGGDFFGV GSSVTLKSAN NTSAAELTSA YLNDTYSLQY 
NGTSWSVTRS DGTSASSTLS GSALTFDGFT IDISGSAASG DTFSFKVSPG KTSISQTAPT 
GSTSAASLTR NDSNYIKASD YNVKFVGPSA SDWSITRLSD GANLSSSATY TAASGSTPAS 
LIFDGMKLDI TGTPAAKDLF MVKGVRDVIV DMSVKVTDSS KIAAAGAPLT SAGGGVSDNT 
NAKALLNLQT AKVVENKSSV SQAYASLVGD IGNKTSTAKV TDTSQKNVVK QLTTEQQSVS 
GVNLDEEYGN LVRFQQYYMA NAKVIQTAST IFDALLAIRG