Gene Dd1591_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1548 
SymbolflhA 
ID8118068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1767405 
End bp1769501 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content51% 
IMG OID644851940 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_003003881 
Protein GI251789160 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1298] Flagellar biosynthesis pathway, component FlhA 
TIGRFAM ID[TIGR01398] flagellar biosynthesis protein FlhA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACC TGGCCTCTTT GCTTCGCCTA CCCGGCAATA TGAAAGGTTC ACAATGGCAG 
ATTCTGGCGG GACCTGTTCT TATATTACTC ATCTTGTCGA TGATGGTTCT GCCGCTGCCG
CCGTTTATTC TGGACTTGCT GTTCACATTT AATATTGCGC TGTCGATTAT GGTACTGCTG
GTCGCCATGT TTACCCAGCG CACACTCGAT TTTGCCGCAT TTCCTACCAT TCTGTTGTTT
TCTACGCTGT TGCGTTTGTC ACTCAACGTA GCATCGACAC GTATCATTCT GATGGAAGGG
CATACTGGCG CAGGTGCGGC TGGGCGAGTG GTTGAAGCGT TCGGGCACTT CCTGGTGGGT
GGTAACTTTG CCATCGGTAT CGTCGTATTC ATTATCCTGG TACTGATTAA CTTTATGGTT
ATCACGAAGG GGGCCGGTCG TATTGCTGAG GTTGGAGCAC GCTTTACACT GGATGGTATG
CCTGGCAAAC AAATGGCAAT TGATGCCGAC CTGAACGCCG GGTTAATTGG TGAGGATGAA
GCTAAGAAAC GGCGTTCGGA AGTGACTCAG GAAGCGGATT TCTATGGGTC GATGGATGGT
GCGAGTAAGT TTGTTCGTGG TGATGCTATC GCCGGCCTGA TGATCATGGC CATTAATATC
ATCGGCGGCT TGCTGGTCGG TGTGGTTCAG CATGACATGG TGTTAGGGCA GGCCGTCGAA
AACTATACGC TGTTGACCAT CGGTGATGGT CTGGTGGCGC AAATTCCGGC GTTGGTGATT
TCGACTGCCG CTGGTGTGAT TGTGACCCGC GTCAGCACGG ATCAAGACGT TGGCCAGCAG
ATGGTCACCC AGCTGTTTAA TAACCCGCGG GTCATGATTT TAAGCGCGGC AGTTTTGGGG
CTTATCGGCT TGGTGCCTGG TATGCCTAAC CTTGTTTTCC TCCTTTTTAC TGCTGCCCTG
TTAGGGTTGG CATGGTGGAT GAGGAAAGGA GAGGAAAGCA AAGCTGCATT TGCTGCGACT
GAGGCTGCAA CCGCTACCCC AACGGCACCA CAGGTGATCG AGGCCAGTTG GTCTGATGTG
CAACTGGAAG ATCCGCTTGG GATGGAAGTC GGGTATCGCC TGATTCCTAT GGTTGATTTT
CAACAAAATG GCGAGTTGCT CGGACGTATC CGTAGTATTC GAAAGAAATT TGCCCAGGAA
ATGGGGTTCC TGCCGCCTGT CGTCCATATT CGGGATAACC TGGATTTACA GCCGGCCAGT
TATCGTATTT TGATGAAAGG TGTTGAGATT GGTAACGGTG AGGCTCATCC AGGACGTTGG
ATGGCGATTA ATCCGGGAAA CGCGGTAGGT ACTCTGCCAG GTGATTTAAC TAAAGATCCC
GCTTTTGGTC TACCAGCAAT CTGGATAGAA AGTGCGCTTA AAGAACAGGC GCAAACGCAA
GGATATACTG TAGTCGAGGC CAGTACAGTT GTGGCGACCC ATCTGAATCA TTTGCTCAGC
TTACATGCCA GTGAGTTATT TGGGCGGCAG GAAGCACAGC AACTGATGGA TCGCGTATCT
CAGGAAATGC CGAAGCTGAC CGAGGATTTC ATTCCGGGTG TAGTGACGTT AACAACGTTA
CACAAGGTTC TGCAGAATTT GTTAAGCGAA CAAGTTTCGA TTCGGGATAT GCGTACAGTT
ATCGAAACAT TGGCCGAACA TGCGGCAGTA CAGACGGACC CAAATGAATT GACGACAGCC
GTGCGTATTG CCCTTGGTCG TGCTATTACC CAGCAATGGT TCCCAGGGGA TACAGAGCTT
CAGGTGATCG GACTTGATGG TGCGCTGGAG CGTCTACTGT TGCAAGCACT TCAGGGCGGT
GGTGGTTTGG AACCGGGATT AAGCGACAGA TTGTTGGATC AGGCTCGGCA GGCATTGCAA
CATCAGGAAG CATTGGGTGC GCCTCCAGTG TTGCTGGTTA ACCATGCATT GCGCGGATTG
TTGTCACGTT TCCTGCGTCG TAGCCTTCCT CAAATTGCCG TATTATCTAA CCTTGAGATT
AGCGACAGCC GTCAAATCAG AATGACGTCG ATGATTGGTG GTGAACTGCC TCGATGA
 
Protein sequence
MANLASLLRL PGNMKGSQWQ ILAGPVLILL ILSMMVLPLP PFILDLLFTF NIALSIMVLL 
VAMFTQRTLD FAAFPTILLF STLLRLSLNV ASTRIILMEG HTGAGAAGRV VEAFGHFLVG
GNFAIGIVVF IILVLINFMV ITKGAGRIAE VGARFTLDGM PGKQMAIDAD LNAGLIGEDE
AKKRRSEVTQ EADFYGSMDG ASKFVRGDAI AGLMIMAINI IGGLLVGVVQ HDMVLGQAVE
NYTLLTIGDG LVAQIPALVI STAAGVIVTR VSTDQDVGQQ MVTQLFNNPR VMILSAAVLG
LIGLVPGMPN LVFLLFTAAL LGLAWWMRKG EESKAAFAAT EAATATPTAP QVIEASWSDV
QLEDPLGMEV GYRLIPMVDF QQNGELLGRI RSIRKKFAQE MGFLPPVVHI RDNLDLQPAS
YRILMKGVEI GNGEAHPGRW MAINPGNAVG TLPGDLTKDP AFGLPAIWIE SALKEQAQTQ
GYTVVEASTV VATHLNHLLS LHASELFGRQ EAQQLMDRVS QEMPKLTEDF IPGVVTLTTL
HKVLQNLLSE QVSIRDMRTV IETLAEHAAV QTDPNELTTA VRIALGRAIT QQWFPGDTEL
QVIGLDGALE RLLLQALQGG GGLEPGLSDR LLDQARQALQ HQEALGAPPV LLVNHALRGL
LSRFLRRSLP QIAVLSNLEI SDSRQIRMTS MIGGELPR