| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1543 |
|---|
| Symbol | |
|---|
| ID | 8117423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1763027 |
|---|
| End bp | 1763899 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644851935 |
|---|
| Product | chemotaxis methyltransferase CheR |
|---|
| Protein accession | YP_003003876 |
|---|
| Protein GI | 251789155 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.520759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATA CACCATCGCC AAATCGTTCA GGTTCTACAT CTATTTTGAG TCAGATGGTT
GAACGGTTAC CGCTGTCTGA TGTTCATTTC CGGCGAATCA GTCAGCTCAT CTATCAACGT
GCCGGCATCG TGCTGGCCGA TCATAAGCGT GAAATGGTCT ACAACCGTTT GGTTAGACGG
CTGCGTTTGC TCGGAATCAA CGATTTTGGT CAGTACCTTG CGTTGTTGGA GTCAGATCAG
AACAGTGCTG AATGGCAGGC ATTTATTAAT GCGTTAACGA CGAATCTAAC GGCATTTTTT
CGCGAGGCGC ACCATTTTCC TATCCTCGCC GACCATGCGC GTAAGCGGCA GGGTGGGTAC
AGTATTTGGT GTACCGCGGC TTCCACCGGG GAGGAGCCTT ATTCTCTGGC TATGACCCTT
GCGGAAGTTT ATGGAGATCG TGCCAGTAAT TGCCAAATTG TAGCCAGTGA TATTGATACA
CAGGTTTTAG AGAAAGCATC TGCGGGTATT TACCGGCAGG AAGATCTGCG TTCGCTTTCT
CCACAACAGA TGCAGCGTTT CTTTTTACGC GGAACCGGAC CACACAGTGG GTTGGTGCGG
GTACGCCCGG ATCTGGCAAG TATGATTCAT TTTCAACAAG TGAATTTGTT GGCGCCGGAA
TGGTCCTTAC CTGCACCGTT TGATGCGATT TTTTGTCGTA ATGTAATGAT TTACTTTGAT
AAAGAAACCC AGGAGCGCAT TTTACGCCGT TTTGTTCCGC TGCTTAAACC CGGCGGATTA
TTGTTTGCCG GACATTCAGA GAACTTCAGT CAGATCAGTC GGGAATTCTA CCTGCGCGGA
CAGACTGTTT ATGGGCTGGC TAAGGAAAGA TAA
|
|---|
| Protein sequence | MKNTPSPNRS GSTSILSQMV ERLPLSDVHF RRISQLIYQR AGIVLADHKR EMVYNRLVRR
LRLLGINDFG QYLALLESDQ NSAEWQAFIN ALTTNLTAFF REAHHFPILA DHARKRQGGY
SIWCTAASTG EEPYSLAMTL AEVYGDRASN CQIVASDIDT QVLEKASAGI YRQEDLRSLS
PQQMQRFFLR GTGPHSGLVR VRPDLASMIH FQQVNLLAPE WSLPAPFDAI FCRNVMIYFD
KETQERILRR FVPLLKPGGL LFAGHSENFS QISREFYLRG QTVYGLAKER
|
|---|
| |