Gene Dd1591_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1540 
Symbol 
ID8117420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1757952 
End bp1759970 
Gene Length2019 bp 
Protein Length672 aa 
Translation table11 
GC content52% 
IMG OID644851932 
Productchemotaxis protein CheA 
Protein accessionYP_003003873 
Protein GI251789152 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0565086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCTT TTTATCAAAC ATTTTTTGAT GAAGCAGATG AATTGTTGGC GGACATGGAG 
CAGCATTTAT TGCAGCTTGA TCCGTTAGCA CCCGATGCGG AACAGATGAA TGCCATATTT
CGCGCTGCTC ACTCGATTAA AGGGGGCGCG GGAACGTTCG GTTTCACTGT ATTACAGGAA
ACTACGCATA TACTGGAAAA CCTGTTGGAC GGTGCCAGGC GCGGTGAAAT GCGCCTGAGT
ACCGATATTA TCAACCTGTT TTTGGAAACC AAAGATATCA TGCAGGATCA GTTGGATGCT
TACAAAACCG CGCAGGAGCC CAACGCCGAA AGCTTTAAGT ATATCTGTCA GGCTCTGCGC
CAGCTTGCTC TGGAGTCCAA AGAAAATGGT ACTGCCGGAG CATCCGCCCC TGACAAGGTA
GAGGCTGAAA AAACGGTTTC CGCTTCTGCC GGCAATCATT CAGGCTTGCG TATCGCTCTT
ACCAACCTGA AAGAATCGGA TATTCCCCAG TTACTTGAAG AACTGGGAAA TCTGGGGACG
GTAAAAGACA CGGTCCAAAC CAGCAGCAGC GTCGAACTCA CGTTGGATAC ATCAGCCAGT
GAGGACGATA TCAGCGCTGT GTTGTGTTTT GTGTTGGATC CGGATCAAAT TAGCTTCAAA
TCGACCTCTG TCGCCGCACC GGTGGAAGTT GCTCCCCCTG CAGCGGAGGT CGTCGCCGAA
CCGGTTGAGC CCGCGCCTGC CCCGGCACCA GTGCAGCCTG CAGCCGCTGC ACCTGCGGCT
AAACCTGCCG GAGGTAATAA TAATGAGGCG GCGAAAGGTA GGCAGAAAAC CGGTGACACC
AGTATCCGCG TAGCGGTAGA AAAGGTTGAC CAGCTTATTA ACTTGGTCGG CGAGCTGGTT
ATTACCCAAT CTATGTTGGC GCAGCGTTCC AGCGCTCTTG ACCCCGTCGC ACATGGCGAT
CTGCTGAATA GCATGGGGCA ACTGGAGAGA AACGCACGTG ACCTGCAAGA GTCCGTGATG
TCCATCCGTA TGATGCCGAT GGAGTATGTC TTTAGCCGTT TCCCACGTCT GGTTCGTGAC
CTGGCTGCTA AATTGGGTAA AGAGGTTGAG CTGACCCAAT TGGGGAGTTC AACCGAGCTG
GATAAGAGCC TTATCGAACG CATTATTGAC CCATTGACGC ATCTTGTGCG TAATAGCCTC
GATCATGGCA TTGAGTCACC GGAAAAACGT ATTGAAGCAG GCAAGTCGGC CGTGGGCAAC
CTAACGTTGT CGGCGGAACA TCAGGGCGGC AATATCTGTA TCGAAGTGAT TGACGACGGT
GCCGGTCTGA ATCGCGAACG TATCCTGGCC AAAGCCCTGT CTCAGGGGAT GGCGGTAAGC
GATAGCATGA CTGATGAAGA AGTCGGTATG CTGATTTTTG CTCCGGGATT TTCTACTGCT
GAGAAAGTGA CCGATGTTTC GGGTCGTGGC GTTGGCATGG ATGTGGTGAA ACGGAATATT
CAGGAGATGG GTGGGCATGT TGAAATTCAT TTCGTGAAAG GGAAAGGGAC TACTATCCGC
ATTCTTCTGC CGTTGACGCT GGCGATCCTG GATGGGATGT CGGTCAAGGT CAATAATGAA
GTGTTTATCC TGCCGCTTAA CGCGGTCATG GAGTCCTCGC AGCCGCAGGC CGAGGATCTG
TATCCTCTGG CGGGGGGGGA GCGCGTGCTG CAGGTTCGTG GTGAATATCT GCCACTGGTT
GAGCTGTATC AGGTATTCGA TGTCGCCGGA GCAAAAACGG ATGCCACTCA AGGTATCGTC
GTTATTCTGC AGAGTGCTGG CCGTCGCTAT GCCTTGCTGG TTGACCAGTT AATTGGTCAG
CATCAGGTCG TTGTGAAAAA CCTGGAAAGC AACTACCGCA AGGTGCCAGG CGTTTCAGCC
GCAACTATTT TGGGTGATGG TAGCGTAGCG CTGATTGTGG ATGTTTCTGC GCTGCAGGCG
CTTTATCGGG AAAAGCGTGT GGTTGAGACC GCAGCTTAA
 
Protein sequence
MSAFYQTFFD EADELLADME QHLLQLDPLA PDAEQMNAIF RAAHSIKGGA GTFGFTVLQE 
TTHILENLLD GARRGEMRLS TDIINLFLET KDIMQDQLDA YKTAQEPNAE SFKYICQALR
QLALESKENG TAGASAPDKV EAEKTVSASA GNHSGLRIAL TNLKESDIPQ LLEELGNLGT
VKDTVQTSSS VELTLDTSAS EDDISAVLCF VLDPDQISFK STSVAAPVEV APPAAEVVAE
PVEPAPAPAP VQPAAAAPAA KPAGGNNNEA AKGRQKTGDT SIRVAVEKVD QLINLVGELV
ITQSMLAQRS SALDPVAHGD LLNSMGQLER NARDLQESVM SIRMMPMEYV FSRFPRLVRD
LAAKLGKEVE LTQLGSSTEL DKSLIERIID PLTHLVRNSL DHGIESPEKR IEAGKSAVGN
LTLSAEHQGG NICIEVIDDG AGLNRERILA KALSQGMAVS DSMTDEEVGM LIFAPGFSTA
EKVTDVSGRG VGMDVVKRNI QEMGGHVEIH FVKGKGTTIR ILLPLTLAIL DGMSVKVNNE
VFILPLNAVM ESSQPQAEDL YPLAGGERVL QVRGEYLPLV ELYQVFDVAG AKTDATQGIV
VILQSAGRRY ALLVDQLIGQ HQVVVKNLES NYRKVPGVSA ATILGDGSVA LIVDVSALQA
LYREKRVVET AA