Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1540 |
Symbol | |
ID | 8117420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 1757952 |
End bp | 1759970 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644851932 |
Product | chemotaxis protein CheA |
Protein accession | YP_003003873 |
Protein GI | 251789152 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0565086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGCTT TTTATCAAAC ATTTTTTGAT GAAGCAGATG AATTGTTGGC GGACATGGAG CAGCATTTAT TGCAGCTTGA TCCGTTAGCA CCCGATGCGG AACAGATGAA TGCCATATTT CGCGCTGCTC ACTCGATTAA AGGGGGCGCG GGAACGTTCG GTTTCACTGT ATTACAGGAA ACTACGCATA TACTGGAAAA CCTGTTGGAC GGTGCCAGGC GCGGTGAAAT GCGCCTGAGT ACCGATATTA TCAACCTGTT TTTGGAAACC AAAGATATCA TGCAGGATCA GTTGGATGCT TACAAAACCG CGCAGGAGCC CAACGCCGAA AGCTTTAAGT ATATCTGTCA GGCTCTGCGC CAGCTTGCTC TGGAGTCCAA AGAAAATGGT ACTGCCGGAG CATCCGCCCC TGACAAGGTA GAGGCTGAAA AAACGGTTTC CGCTTCTGCC GGCAATCATT CAGGCTTGCG TATCGCTCTT ACCAACCTGA AAGAATCGGA TATTCCCCAG TTACTTGAAG AACTGGGAAA TCTGGGGACG GTAAAAGACA CGGTCCAAAC CAGCAGCAGC GTCGAACTCA CGTTGGATAC ATCAGCCAGT GAGGACGATA TCAGCGCTGT GTTGTGTTTT GTGTTGGATC CGGATCAAAT TAGCTTCAAA TCGACCTCTG TCGCCGCACC GGTGGAAGTT GCTCCCCCTG CAGCGGAGGT CGTCGCCGAA CCGGTTGAGC CCGCGCCTGC CCCGGCACCA GTGCAGCCTG CAGCCGCTGC ACCTGCGGCT AAACCTGCCG GAGGTAATAA TAATGAGGCG GCGAAAGGTA GGCAGAAAAC CGGTGACACC AGTATCCGCG TAGCGGTAGA AAAGGTTGAC CAGCTTATTA ACTTGGTCGG CGAGCTGGTT ATTACCCAAT CTATGTTGGC GCAGCGTTCC AGCGCTCTTG ACCCCGTCGC ACATGGCGAT CTGCTGAATA GCATGGGGCA ACTGGAGAGA AACGCACGTG ACCTGCAAGA GTCCGTGATG TCCATCCGTA TGATGCCGAT GGAGTATGTC TTTAGCCGTT TCCCACGTCT GGTTCGTGAC CTGGCTGCTA AATTGGGTAA AGAGGTTGAG CTGACCCAAT TGGGGAGTTC AACCGAGCTG GATAAGAGCC TTATCGAACG CATTATTGAC CCATTGACGC ATCTTGTGCG TAATAGCCTC GATCATGGCA TTGAGTCACC GGAAAAACGT ATTGAAGCAG GCAAGTCGGC CGTGGGCAAC CTAACGTTGT CGGCGGAACA TCAGGGCGGC AATATCTGTA TCGAAGTGAT TGACGACGGT GCCGGTCTGA ATCGCGAACG TATCCTGGCC AAAGCCCTGT CTCAGGGGAT GGCGGTAAGC GATAGCATGA CTGATGAAGA AGTCGGTATG CTGATTTTTG CTCCGGGATT TTCTACTGCT GAGAAAGTGA CCGATGTTTC GGGTCGTGGC GTTGGCATGG ATGTGGTGAA ACGGAATATT CAGGAGATGG GTGGGCATGT TGAAATTCAT TTCGTGAAAG GGAAAGGGAC TACTATCCGC ATTCTTCTGC CGTTGACGCT GGCGATCCTG GATGGGATGT CGGTCAAGGT CAATAATGAA GTGTTTATCC TGCCGCTTAA CGCGGTCATG GAGTCCTCGC AGCCGCAGGC CGAGGATCTG TATCCTCTGG CGGGGGGGGA GCGCGTGCTG CAGGTTCGTG GTGAATATCT GCCACTGGTT GAGCTGTATC AGGTATTCGA TGTCGCCGGA GCAAAAACGG ATGCCACTCA AGGTATCGTC GTTATTCTGC AGAGTGCTGG CCGTCGCTAT GCCTTGCTGG TTGACCAGTT AATTGGTCAG CATCAGGTCG TTGTGAAAAA CCTGGAAAGC AACTACCGCA AGGTGCCAGG CGTTTCAGCC GCAACTATTT TGGGTGATGG TAGCGTAGCG CTGATTGTGG ATGTTTCTGC GCTGCAGGCG CTTTATCGGG AAAAGCGTGT GGTTGAGACC GCAGCTTAA
|
Protein sequence | MSAFYQTFFD EADELLADME QHLLQLDPLA PDAEQMNAIF RAAHSIKGGA GTFGFTVLQE TTHILENLLD GARRGEMRLS TDIINLFLET KDIMQDQLDA YKTAQEPNAE SFKYICQALR QLALESKENG TAGASAPDKV EAEKTVSASA GNHSGLRIAL TNLKESDIPQ LLEELGNLGT VKDTVQTSSS VELTLDTSAS EDDISAVLCF VLDPDQISFK STSVAAPVEV APPAAEVVAE PVEPAPAPAP VQPAAAAPAA KPAGGNNNEA AKGRQKTGDT SIRVAVEKVD QLINLVGELV ITQSMLAQRS SALDPVAHGD LLNSMGQLER NARDLQESVM SIRMMPMEYV FSRFPRLVRD LAAKLGKEVE LTQLGSSTEL DKSLIERIID PLTHLVRNSL DHGIESPEKR IEAGKSAVGN LTLSAEHQGG NICIEVIDDG AGLNRERILA KALSQGMAVS DSMTDEEVGM LIFAPGFSTA EKVTDVSGRG VGMDVVKRNI QEMGGHVEIH FVKGKGTTIR ILLPLTLAIL DGMSVKVNNE VFILPLNAVM ESSQPQAEDL YPLAGGERVL QVRGEYLPLV ELYQVFDVAG AKTDATQGIV VILQSAGRRY ALLVDQLIGQ HQVVVKNLES NYRKVPGVSA ATILGDGSVA LIVDVSALQA LYREKRVVET AA
|
| |