| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1486 |
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| Symbol | |
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| ID | 8117361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 1704300 |
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| End bp | 1705016 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644851877 |
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| Product | type IV secretion system family protein |
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| Protein accession | YP_003003823 |
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| Protein GI | 251789102 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACCC GCTATCTCTT CCTGGCGTTC TCGCTATGGC TGTCCGCACC GGCGATAAGT
GCCGGTATCC CGGTGTTTGA TGCCGTCAAC AATGCCGAGT CGATTAATCA ATGGATGCAA
AAACTCAAAC AATGGCAGGA AACCGTTACC CACTATAAAG ACGAGCTGGA TGCTTATAAA
CAGCAATTGG CGACTGCAAC AGGGATACGG GATATTCAGG GGTTTCTCCG CGAGGCAAAA
AGCCTGAAAG ACGATATCGA CGCGCTTCGC AAGAACGGTA TTTCACTGGA TGACCTGCTG
ACCAATCCAG ACGGTTCCTA TTCTTCCGCG CTTCAGGGGT TATATAAAAA ATACCAATCG
TTTGATAGCT GTAACCCGTC CCGTTCATCC CTGCGTTATC AGGACAGTTG CAAACAGCTG
TTACTCAATC AGGCACTGGC GATTGAGAAT ACCCGTGAGG TTCAGGACAG GATGACCAGC
ACGTTGAACG ACATCGCAGA CCTGTCTGAC CGCATCGCCA ATGCCAAAGA TTCGAAAGAA
TCACAGGACC TGGCGAATGC CGTTGCGGCC AAAAGCGTGC AACTGAACGC CCTGACCAGC
CAGTGGGAGA TGTCTGTCCG GCAGACGGAG CAGCGGGCAA TACTGCTGGA GCAGAAACGG
CAAAATGCAT TCAATGAACA GCAACTTGCC GCGCCGGTTC CCGATTTTAA TCATTGA
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| Protein sequence | MQTRYLFLAF SLWLSAPAIS AGIPVFDAVN NAESINQWMQ KLKQWQETVT HYKDELDAYK
QQLATATGIR DIQGFLREAK SLKDDIDALR KNGISLDDLL TNPDGSYSSA LQGLYKKYQS
FDSCNPSRSS LRYQDSCKQL LLNQALAIEN TREVQDRMTS TLNDIADLSD RIANAKDSKE
SQDLANAVAA KSVQLNALTS QWEMSVRQTE QRAILLEQKR QNAFNEQQLA APVPDFNH
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