Gene Dd1591_1482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1482 
Symbol 
ID8117357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1702121 
End bp1702804 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content55% 
IMG OID644851873 
ProductVirB8 family protein 
Protein accessionYP_003003819 
Protein GI251789098 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3736] Type IV secretory pathway, component VirB8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.96706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAA CAGAAAACCT CATTGCGTCA TCCCGCACCT TTGAAGCGGT TCTGCTGGAA 
AAGGATGAAC GGGAAAAAAA GCGCGCATGG CGCATGGCGG CAACCGGGTT TGCGCTGGCG
GCGCTGACGA TAACCGCGCT GATTATTCTG CTGCCGCTGA AAACCACCGA CATCGAATTA
TGGTCGGTGG ATAAACAGAC CGGGCGCTAT GAATATATGA CCCGTCTCAA GGAGAAGGAT
ATCGCTACCG AAGCAGCGCT GGCGCATGCG CTATCCGCCC AGTACGTCCG GCTGCGCGAA
GGCTATAACT ATTTTGCGCT TCAGCACGAT TATGACGACG TGCAGCTATT CAACAGCGAC
AGCGTGAACC GGGATTACCT CGACGAGTTT AACGGCAATC AGGCCCCCGA CGTCATGTTC
AATAAAGCGG AATACGTCGT GTCTGTCGAG ATTATTTCCA ACATTCACGC CCCCGCCACC
GCCCCTGACC ACCTGGCAAC CTTGCGAGTT AAACGCATAA TCCGCCGCAT TGCGGATAAC
ACGGTCAAAA CGGATATCTG GAACATCCGC CTGACCTACC GCTACCTCCC CCGCAAACAA
CTGACGGACA GCCAGCGAGA AGTGAACCCA TTGGGGTTCA TCGTCACCAG CTACCAGCGC
GATAAAGAAC TGAGGGGGGA GTGA
 
Protein sequence
MSETENLIAS SRTFEAVLLE KDEREKKRAW RMAATGFALA ALTITALIIL LPLKTTDIEL 
WSVDKQTGRY EYMTRLKEKD IATEAALAHA LSAQYVRLRE GYNYFALQHD YDDVQLFNSD
SVNRDYLDEF NGNQAPDVMF NKAEYVVSVE IISNIHAPAT APDHLATLRV KRIIRRIADN
TVKTDIWNIR LTYRYLPRKQ LTDSQREVNP LGFIVTSYQR DKELRGE