| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1480 |
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| Symbol | |
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| ID | 8117355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 1700032 |
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| End bp | 1701234 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644851871 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_003003817 |
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| Protein GI | 251789096 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.360825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACC ATCCCATCCC GGATACAGCG GAAAAAACCG TGGCTGAGCG GGAAGCCGAA
GCCCGTGAAC GCGCCAGAGC CGCGAGAGAA AGCCAGACAC CGGCGCACAA CACGCCGCCC
GGTCAGCCGG AAGTCACCCG CTTTAAAAAA CCCGCTAGTC GCCGAACGCT GCTGGTCAGC
CTGCTCAGTC TGGCTGTGCT GATGCTGCTG GCATGGAGTG GGGATCGCTT TTTTGGCGCA
GTCAAACACA GCGATGACAA GGCGGCGGAG ACCCAGCCGC CGACCGGTGT AATACCGCCT
GCGCGTAAAA ACCTCGGTAT GGACCGTCAT CCGTTCGGTC TGTTCGAGCA GAGCAGACCG
GAAACCACAA CGGATCATCG CCAGACGCAG GCTGCTCCGC CACCGCCAGC ACCGCCCGCG
TTAAACAAAG CCGCCGCCCT GGCCGACGGG TTAAGTCAGG CGTCAGATAC CGCATCGGCT
TCCCACGTCA CCGCCTCCGG CACCGACAAG CAAAAGCCCA CTACCGCGCC TGCCCCGGAG
ATAAAAGACA CCGCTCCCGG CGTGGTAACA GTCACCCACG TCCGGCGGCT CGGTCTCGAT
CCCGATCTCT ACCTGCCAGT TGATAGCTAC ATTCCCTGCT CGATGATGCA GCGCTTTGTT
TCCGATGTCG GCGGGCGGAT TTCCTGCCTC ATCAGCGAGG ATGTCTACAG CGCCAGTCAT
CATGTGAAGC TGCTCCCGGC AGGCACGGTC GCCCGTGGCG TCTATCGTAC CGGCGCACTG
CTACAGGGCC GGAGCCGGAT GTTTGTCATC TGGACGGCGT TACGCACACC AGAGCCCGGT
AGCCTGCACA TTCCGCTGAC CGATACCGAG GCCAGCGGCC CGTTGGGAGA AGCCGGGATT
AGCGGCAGGA TCGATACCCA TTTCTGGGAG CGGTTCGGCA ATGCATTGAT GTTGAGCACA
GTGCAGGACG TCGCCGCAGC GGCGGCGAAT ACAGCGCCGG GGAAAGACCG TAATACCGAC
TACACCGAGA ATACGCGTGC TGCCGCCTCG GAGATGGCAA AAACGGCCCT GGAAAACAGC
ATCAATATCC CGCCCACGAT GTACCTCAAT CAGGGGGATG TGATCGGCAT CATGACCGGC
ACGGATATCG ATTTCTCTTC CGTTTATCAA CTGCGTCTGA AAAAGAGGTG GTATGAACGC
TGA
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| Protein sequence | MTDHPIPDTA EKTVAEREAE ARERARAARE SQTPAHNTPP GQPEVTRFKK PASRRTLLVS
LLSLAVLMLL AWSGDRFFGA VKHSDDKAAE TQPPTGVIPP ARKNLGMDRH PFGLFEQSRP
ETTTDHRQTQ AAPPPPAPPA LNKAAALADG LSQASDTASA SHVTASGTDK QKPTTAPAPE
IKDTAPGVVT VTHVRRLGLD PDLYLPVDSY IPCSMMQRFV SDVGGRISCL ISEDVYSASH
HVKLLPAGTV ARGVYRTGAL LQGRSRMFVI WTALRTPEPG SLHIPLTDTE ASGPLGEAGI
SGRIDTHFWE RFGNALMLST VQDVAAAAAN TAPGKDRNTD YTENTRAAAS EMAKTALENS
INIPPTMYLN QGDVIGIMTG TDIDFSSVYQ LRLKKRWYER
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