| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1455 |
|---|
| Symbol | |
|---|
| ID | 8120497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1661363 |
|---|
| End bp | 1664071 |
|---|
| Gene Length | 2709 bp |
|---|
| Protein Length | 902 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644851849 |
|---|
| Product | Ankyrin |
|---|
| Protein accession | YP_003003795 |
|---|
| Protein GI | 251789074 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0666] FOG: Ankyrin repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGT TGCCACTAGC CGAAGCCATC TTACTGGAAA TTCATCAAAG CCTTGGCTGT
CAGAGTTATC CGACAATCAA GAAAACTAAA TTCGCGACCG GACAGATAAG CCGTAAAACT
CATAAGGATA TGGGTGAAGA AATCCTCAAC GATATCTTAG AAGCGCTGGG TATGGATCCA
CTGGCGCAGA GGAGTGTCAT CAACAACCTC ATGGAATTTG CGAACGCCTA CAAGTCTCTT
GAGCTGAACA CCTGGACATT CGCCGCTGAC CAACGACAGA TCCTCTGGAC GATGTTGGCG
CATTTCTACG TGCCTGGTCT GGCTCGCCGT GTCGGCTTCT GGAGCCTTGA AGAAGCACTG
GATACGGGTA TGTCGGGTGG GCGTTTCTGG TATTTGCCAG AGCCTTACGA ATTGGATGGC
AAGCCTGGCC TGTATCTGCC GGTTGCTCAG GTGGTCGATT GGCTGCTTGA TTTGCTGGGT
ATGCCTCTGG AGACGTTTGC GGATCTGCAA AGTGGAACTA TGGAAAATGG CTATGATGGC
CTGCGTCGAT CCTTGTATAA CTGGCGTAAT GGAACCACCA TTCGCCCCGA GACCATTGAT
AAGTACTTCT CTGACAAGAC CGACCTGCGT TTTGACGGAG CGGTATCACT CCACAGCGAT
TGGAGCCCTT CTGAGAAGTT CATCAGCGTT CTGAATTTTT TGAAAAATAA GGAATTGACT
GCCGATAAGC TGAGGTTGGA AATCCCTATG ACTCAACCTG GGCGCATAGA GTCAATTCTT
GCAGGGCAGG CAGATGAAGA CGAGCAAGCC ACCTTCGTTA AATGCATCGC GGAGCGTTAT
GCTGCGCCGT TACCCCAAAC TATCCGCCAA CGCTTGTTAT TCGCTCGGAC GGTGCAGGAT
GGTTATGTAC GACTACTCAA ATACCTCTTT CCCGATGTTG ACAAGTTATG TGCGAACCCT
CAGCAAAATA AATTGCTTCA ACTATTTGCC ATCTATAAGG CTGTCTACAA CCTGACAATC
AATGCACACC GATATTGCAG AGAGAAGGGT GAAGCGGCTG AAAATGCCTG GTTCGAGGCA
CGCCTGCCTG AATGGGATAA ATACGGCTTA TTCCTTTCGA TCCTTCCTTC TCATCGGGAA
ACAGCAAACC TAGAGCTTGC TCAGTTATTG ACTCGTCATT TCTACCATTT GCAGCCTGGG
GCGATGCTTG AAGATATCTT TGCACTAGAC GCAGCATCCG CTGTACCCAT CATTCAAAAA
AAGATGGAAC TCCTCAAGGC ACATGTTGAT GAGAGACAAG CGATCCATCG GTTGATTGAC
CGGATGAGAA CCTCATCGCC TTGGCGCGTC TTGCAGACCG AGCATAGATA TTGGGTCGTC
AGTCAGGTCG CACAGCATTC AACCCTGAGC AACCGCGGCA AAGAGGCAAC TATCCAGCGT
TTGCGAGAGC TGGCTGCAAC ACCAGTTGAA ACCGTTCAAA CAATTCTGCT CGAGCTGGAC
GGTTATCTGA ATGGTGATCG CAAACAAAGA CCAAAAGACA CAATAGCCAA GGTGAAAGCC
CTACTTGATG AAGCTGAAGC CAGCTCAGGA TATGAGTTAT GGAAAGCACC CATTTTGCAA
TACAAAGCCA AGCACCTGCT TGCCAGTAAT GATTTCGAGG GGGCAGCCAA ACAACTCAGG
GCAGCGATGG ATGCCGCTCT GGAACGAAAT TATGGCTCTT GGCGAGGTGA GCTCGCGAGA
GATAGTCTGG CCTTAGAAGT TGCCAACCAG AAACTAATCA CCAATAACCA CGAAAAGTAC
TATCGGGAGA TGCTGGCCGG AGGAATGATG GACGAGTGCG ATACGATTCC ATCTATCGAG
GAAATTGCAC GCTGGGCTTC AGATTATTTT TGGAATGATC TGTACAAACC CTATCCTGGT
ATTGAGGCCG AAGTGCGCAG CATAAAAAGT ACGATGGATA AGTTATTTAA CGAGCTGCTG
CCATTGTTCA AAGCTGGAGA TCAGGGGGGA TTACAAAAAT GGATCAAAGC CAGTCGTTCA
TTGTTGAAAT CTAACCTGCC TGATGTAGAT GGAAATTCCG TATTGATGGC TTTGATCAAG
GTGCATTCTC TGTTTGTGCA GATGAAGAAA GCGGTTCCCC CCGAGCTGCA AAGCGAAACT
CGTCGGTTCG AAACAATGTT AGAGAATTGG CGATCATTTA TTGGGCAACT AGCTCAAGAG
AGTCCTAAAC AACTTAATAT CCCTGATATT AAAGGGCAAA CCCCGTTGAT GCTGATGACA
GAAGAAGGTG ATACCGAGCT GGTAATACTG ATGCTCAAAG CTGGCGCCAA TCCAGAAATA
CGAACCAATA GAGGTATGAC TGCTCTTCAT TCGGCGATCA AGGCTGGGGT CGATAGTTGT
GTGGATGCAC TCCTCGATCA CCCGTGCAAT CTAGACAACC TCACTGATGA TGGGCAATCA
CCATTGCATA CTGCAAGTTG GACGGCCAAT TTACATGCCG TCAGGCGCTT GCTGCAGCTT
GCCCCCAAAC TTGCTTGGCA GCGCAACTCT CAGGGAATGA CTCCTCTAGA ACGGGTTGAG
TACTTGATCG AGAACCCAGA GGCGTTAAGA CTGTTGACTA ACGGACGAGC TCAACATGTG
CGAGGCTGTG CCACCAGGCA AGAGTTGGTA ACGGTCGCAG AGTTACTTGC GCAAGCAAGG
CCGGTGTAA
|
|---|
| Protein sequence | MSTLPLAEAI LLEIHQSLGC QSYPTIKKTK FATGQISRKT HKDMGEEILN DILEALGMDP
LAQRSVINNL MEFANAYKSL ELNTWTFAAD QRQILWTMLA HFYVPGLARR VGFWSLEEAL
DTGMSGGRFW YLPEPYELDG KPGLYLPVAQ VVDWLLDLLG MPLETFADLQ SGTMENGYDG
LRRSLYNWRN GTTIRPETID KYFSDKTDLR FDGAVSLHSD WSPSEKFISV LNFLKNKELT
ADKLRLEIPM TQPGRIESIL AGQADEDEQA TFVKCIAERY AAPLPQTIRQ RLLFARTVQD
GYVRLLKYLF PDVDKLCANP QQNKLLQLFA IYKAVYNLTI NAHRYCREKG EAAENAWFEA
RLPEWDKYGL FLSILPSHRE TANLELAQLL TRHFYHLQPG AMLEDIFALD AASAVPIIQK
KMELLKAHVD ERQAIHRLID RMRTSSPWRV LQTEHRYWVV SQVAQHSTLS NRGKEATIQR
LRELAATPVE TVQTILLELD GYLNGDRKQR PKDTIAKVKA LLDEAEASSG YELWKAPILQ
YKAKHLLASN DFEGAAKQLR AAMDAALERN YGSWRGELAR DSLALEVANQ KLITNNHEKY
YREMLAGGMM DECDTIPSIE EIARWASDYF WNDLYKPYPG IEAEVRSIKS TMDKLFNELL
PLFKAGDQGG LQKWIKASRS LLKSNLPDVD GNSVLMALIK VHSLFVQMKK AVPPELQSET
RRFETMLENW RSFIGQLAQE SPKQLNIPDI KGQTPLMLMT EEGDTELVIL MLKAGANPEI
RTNRGMTALH SAIKAGVDSC VDALLDHPCN LDNLTDDGQS PLHTASWTAN LHAVRRLLQL
APKLAWQRNS QGMTPLERVE YLIENPEALR LLTNGRAQHV RGCATRQELV TVAELLAQAR
PV
|
|---|
| |