Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1434 |
Symbol | |
ID | 8120476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 1634310 |
End bp | 1635692 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644851829 |
Product | pectate lyase |
Protein accession | YP_003003775 |
Protein GI | 251789054 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02474] pectate lyase, PelA/Pel-15E family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATACC CTCATACCCG TTTATCCCTG CTCAGCTTGA GCTTGTTTGC CGGTTTGTCC GCCGGCTTGC TGGCGTCGTC GCCGGGTTAT GCCGCCGTCG CTGGGTGCGG TCAAAACTGT ATCGATTATC TGCGTGAAAA CGTGCAGGCC AGGCCGTTGA CGGCGGCGAG TATCGCTACC GTCAGCGATG CGACGTTGCG CACCCAGTTC ACCAACTACC TCGCCACATC GGCCAGCGCC CGCAGCGCGG ATAAAGCCGC CCTCGCCGCA GAGCGGAAAG GGATGACGAC CGTGCCGGCA CCGCGTGGGT CGGGCAAAAA CAACCTCGCT ACCATGCCGC TCAATCAATC GGGCACGTAT TACCAGTCGG CAGAGGCGCT CGCCATCGCT CAGGAGATCA TCAGCTTCCA GATCCCTTCC GGCGGTTGGG GTAAAAACAT GTCGCGTACC GGCGTCGCAC GTACTCAAGG CCAGTCTTAC ATCGTCGATG AGATTGACCC AAGCGAATCG GGCAGTTGGC GCTATGTCGG CACCATTGAT AACGGCGCCA CCACCACCGA ACTGCGTTAT CTGGCCAAAG TGCAAGCCGC GCGGACAGGC AGCAGCGAGA CCGCAACGCT ACAGGCGAGC ATTGTCCGCG GCATCAAGTA TTTGATCGCC GCGCAATATC CTAATGGCGG CTGGCCTCAG GTTTACCCGC TGGCGGGCAG CTATAACGAC GCCATTACGC TCAATGACGA CGCCATGCTG CGGGTAGTGA TGCTGCTCAA CGAAATAGGT AACAGCAGTA ACAGTGATTT TGCCTTCCTG GATCGCAACC TGCGCAACAG TGCAGCCCAA GCAGCCACCA AAGGCACAAC CTGGCTGGTG AACAATCAGG TGAAAGTCAG CGGCGAGTGG ACTATCTGGG GGCAACAACA CGATATGCTG ACGCAATTGC CGACCGCCGC GCGAGCGTTC GAAATGGCGG CGCTCAGCAG CGCTGAAAGC GCCAAAATCA CCGCGTTCCT GATGACGTTG CCCAACCCCG ACGCCAAAAT GCGGCGTGCG GTGTACGCCG CGGCCGATTT CTTCACCGCA ACGCGCATCT CCGGGCAATC CTGGTCGAAC GGCAAACTCT CCAGCTCACC GAACGGCGTG TTGTGGGCCC GCTTCTACGA TTTGGATGCG TATACGCCGA GCGCAAGCAG TGTGGCCAAG CGTTCTCAGA CATTGTTTGG CGATCGCCCG GATACGCACG CCACCAGCGC GTATGGTCTG GTCTTCAGTT CCATTGCCTC GGTATCGACT GAGCGGTTAA CCGGCTATGC CCAGTACAAC TCGTCACCGC AGAGCGTCCT GACGACTTTT GCCACCTGGA GTAAGAGCAA CCCGCGCCCC TGA
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Protein sequence | MSYPHTRLSL LSLSLFAGLS AGLLASSPGY AAVAGCGQNC IDYLRENVQA RPLTAASIAT VSDATLRTQF TNYLATSASA RSADKAALAA ERKGMTTVPA PRGSGKNNLA TMPLNQSGTY YQSAEALAIA QEIISFQIPS GGWGKNMSRT GVARTQGQSY IVDEIDPSES GSWRYVGTID NGATTTELRY LAKVQAARTG SSETATLQAS IVRGIKYLIA AQYPNGGWPQ VYPLAGSYND AITLNDDAML RVVMLLNEIG NSSNSDFAFL DRNLRNSAAQ AATKGTTWLV NNQVKVSGEW TIWGQQHDML TQLPTAARAF EMAALSSAES AKITAFLMTL PNPDAKMRRA VYAAADFFTA TRISGQSWSN GKLSSSPNGV LWARFYDLDA YTPSASSVAK RSQTLFGDRP DTHATSAYGL VFSSIASVST ERLTGYAQYN SSPQSVLTTF ATWSKSNPRP
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