Gene Dd1591_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1434 
Symbol 
ID8120476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1634310 
End bp1635692 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content60% 
IMG OID644851829 
Productpectate lyase 
Protein accessionYP_003003775 
Protein GI251789054 
COG category 
COG ID 
TIGRFAM ID[TIGR02474] pectate lyase, PelA/Pel-15E family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATACC CTCATACCCG TTTATCCCTG CTCAGCTTGA GCTTGTTTGC CGGTTTGTCC 
GCCGGCTTGC TGGCGTCGTC GCCGGGTTAT GCCGCCGTCG CTGGGTGCGG TCAAAACTGT
ATCGATTATC TGCGTGAAAA CGTGCAGGCC AGGCCGTTGA CGGCGGCGAG TATCGCTACC
GTCAGCGATG CGACGTTGCG CACCCAGTTC ACCAACTACC TCGCCACATC GGCCAGCGCC
CGCAGCGCGG ATAAAGCCGC CCTCGCCGCA GAGCGGAAAG GGATGACGAC CGTGCCGGCA
CCGCGTGGGT CGGGCAAAAA CAACCTCGCT ACCATGCCGC TCAATCAATC GGGCACGTAT
TACCAGTCGG CAGAGGCGCT CGCCATCGCT CAGGAGATCA TCAGCTTCCA GATCCCTTCC
GGCGGTTGGG GTAAAAACAT GTCGCGTACC GGCGTCGCAC GTACTCAAGG CCAGTCTTAC
ATCGTCGATG AGATTGACCC AAGCGAATCG GGCAGTTGGC GCTATGTCGG CACCATTGAT
AACGGCGCCA CCACCACCGA ACTGCGTTAT CTGGCCAAAG TGCAAGCCGC GCGGACAGGC
AGCAGCGAGA CCGCAACGCT ACAGGCGAGC ATTGTCCGCG GCATCAAGTA TTTGATCGCC
GCGCAATATC CTAATGGCGG CTGGCCTCAG GTTTACCCGC TGGCGGGCAG CTATAACGAC
GCCATTACGC TCAATGACGA CGCCATGCTG CGGGTAGTGA TGCTGCTCAA CGAAATAGGT
AACAGCAGTA ACAGTGATTT TGCCTTCCTG GATCGCAACC TGCGCAACAG TGCAGCCCAA
GCAGCCACCA AAGGCACAAC CTGGCTGGTG AACAATCAGG TGAAAGTCAG CGGCGAGTGG
ACTATCTGGG GGCAACAACA CGATATGCTG ACGCAATTGC CGACCGCCGC GCGAGCGTTC
GAAATGGCGG CGCTCAGCAG CGCTGAAAGC GCCAAAATCA CCGCGTTCCT GATGACGTTG
CCCAACCCCG ACGCCAAAAT GCGGCGTGCG GTGTACGCCG CGGCCGATTT CTTCACCGCA
ACGCGCATCT CCGGGCAATC CTGGTCGAAC GGCAAACTCT CCAGCTCACC GAACGGCGTG
TTGTGGGCCC GCTTCTACGA TTTGGATGCG TATACGCCGA GCGCAAGCAG TGTGGCCAAG
CGTTCTCAGA CATTGTTTGG CGATCGCCCG GATACGCACG CCACCAGCGC GTATGGTCTG
GTCTTCAGTT CCATTGCCTC GGTATCGACT GAGCGGTTAA CCGGCTATGC CCAGTACAAC
TCGTCACCGC AGAGCGTCCT GACGACTTTT GCCACCTGGA GTAAGAGCAA CCCGCGCCCC
TGA
 
Protein sequence
MSYPHTRLSL LSLSLFAGLS AGLLASSPGY AAVAGCGQNC IDYLRENVQA RPLTAASIAT 
VSDATLRTQF TNYLATSASA RSADKAALAA ERKGMTTVPA PRGSGKNNLA TMPLNQSGTY
YQSAEALAIA QEIISFQIPS GGWGKNMSRT GVARTQGQSY IVDEIDPSES GSWRYVGTID
NGATTTELRY LAKVQAARTG SSETATLQAS IVRGIKYLIA AQYPNGGWPQ VYPLAGSYND
AITLNDDAML RVVMLLNEIG NSSNSDFAFL DRNLRNSAAQ AATKGTTWLV NNQVKVSGEW
TIWGQQHDML TQLPTAARAF EMAALSSAES AKITAFLMTL PNPDAKMRRA VYAAADFFTA
TRISGQSWSN GKLSSSPNGV LWARFYDLDA YTPSASSVAK RSQTLFGDRP DTHATSAYGL
VFSSIASVST ERLTGYAQYN SSPQSVLTTF ATWSKSNPRP