| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1430 |
|---|
| Symbol | |
|---|
| ID | 8120472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1628323 |
|---|
| End bp | 1629312 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644851825 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_003003771 |
|---|
| Protein GI | 251789050 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTATG TTGGTATTGA TATCAGTAAG CGTGTCGTCG ACGTATGTCT GTTAGCTGAT
GGCATTAAAG GTAAACGGAA GACGAAAACG TTACCCAATG GCCCCAGAGC GGTTGAGGCG
TTGGCTGAAT GGCTAACGCG GCAAAAATGT GACCTGGGTC AGGCCCATAT CGTTATGGAA
GCAACGGGGA TTTATCACGA ACACCTCGCT TATGGTCTTC ATCAGTCAGG TATTGCCGTA
TCGGTGATAA ATCCCCACCG TTTGCGAGAG TTTGCCAAAG GAATGGGGAT TCTCACGAAG
ACGGATAAAG TGGATGCCTA TGTGCTGGCC TGTTATGGCT GTCTGAGGCA GCCGGAGGGC
TGGACGCCTC CTTCGCCAGA AATAAGGAAA CTCAGGGCAT TACTGCAGCA CAGGGATAGT
CTGCTGGGTG ATAAACAGCG TCTGGAAAAC CGGCTGAGCG CGTTAAGTTC GACACTGACA
ACAGAAGAAG TGATGGCATC ACTGGAATCG ATGGTGCAGC ACGTGAAGGG TGAGCTGGAG
CGTATAGAAG GGCTGATAGC GGACCACATA GACAAACATC CCGGACTCAA GAACGACCTG
AAACTTCTGA AGTCGATAGA TGGTGTTGGA GACCAAATCG GATGGAATAT GTTGGCTACC
ATCCGGGGCA GTAACTTCAG GAGTGCAGAA CAGGTGGCGG CGTATCTGGG GGTTATCCCG
GTAGAGCGTC GCTCAGGAAC CTCGGTACGG GGCAGAGCCA GGTTGTCAAA AATCGGGCCA
TCCGCGATGC GGGCAAAGCT GTATATGGGA GCGATAGCGG CCATCAGTCA CAATCATCAT
GTGAAGGCGC AATACGAGCG ACTGTTGCTA AAAGGCAAGG CAAAGATGCT GGCGATAGGG
GCGGCGATGA GAAAACTGGT CCATCTGTGT TACGGCGTGC TGCATACGCA GCAACCATAT
GACAGGAATT ATGGGGTAGT AGCCAGTTGA
|
|---|
| Protein sequence | MYYVGIDISK RVVDVCLLAD GIKGKRKTKT LPNGPRAVEA LAEWLTRQKC DLGQAHIVME
ATGIYHEHLA YGLHQSGIAV SVINPHRLRE FAKGMGILTK TDKVDAYVLA CYGCLRQPEG
WTPPSPEIRK LRALLQHRDS LLGDKQRLEN RLSALSSTLT TEEVMASLES MVQHVKGELE
RIEGLIADHI DKHPGLKNDL KLLKSIDGVG DQIGWNMLAT IRGSNFRSAE QVAAYLGVIP
VERRSGTSVR GRARLSKIGP SAMRAKLYMG AIAAISHNHH VKAQYERLLL KGKAKMLAIG
AAMRKLVHLC YGVLHTQQPY DRNYGVVAS
|
|---|
| |