| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1427 |
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| Symbol | |
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| ID | 8120469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 1623390 |
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| End bp | 1626440 |
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| Gene Length | 3051 bp |
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| Protein Length | 1016 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644851822 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_003003768 |
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| Protein GI | 251789047 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.50627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGTCA GCAGAAGGCA GTTCTTTAAA ATATGCGCAG GCGGTATGGC CGGAACGACG
GTCACCGCAC TGGGCTTCTC ACCCAGCGCG GCGTTAGCCG AAACGCGGCA ATACAAGCTG
TTGCGCGCCA AAGAGACCCG AAATAATTGC ACCTACTGTT CAGTAGGATG CGGCATTCTG
ATGTACAGCC TCGGCGACGG CGCCAAAAAC GCCACCGCAT CCATTTATCA CATCGAAGGG
GATCCGGATC ATCCGGTCAG CCGCGGTTCA TTGTGCCCGA AAGGCGCCGG GCTGGTGGAT
TTCATCCATA GCGACCAACG CCTGAAATAC CCGGAATACC GCGCGCCGGG TTCCGACAAA
TGGCAGCGCA TCAGTTGGGA AGACGCGTTT GATCGCATCG CTCACCTGAT GAAAAAAGAC
CGCGACGCCA ATTTCGTCGA GAAGAACGCC GCCGGGGTGA CGGTTAACCG CTGGTTGACC
ACCGGGATGC TGTGTTCCTC CGCCGCCAGT AATGAAACCG GGATACTGGA TCAAAAATTT
GCCCGCGCGC TGGGGATGAT CGGCATCGAT ACCCAGGCGC GTCTGTGCCA CGGCCCGACC
GTTTCGGCGC TGGCGCCGAC CTTTGGCCGC GGTGCCATGA CCAACAACTG GGTAGACATC
AAAAACGCCA ATGTGATTCT GGTGATGGGC GGCAACCCGG CGGAAGCGCA CCCGGTCGGG
TTCAAATGGG CGGTAGAAGC CAAGATTCAC AATGGCGCCA AACTGATCGT CGTCGACCCG
CGCTTCAATC GTTCGGCCGC CGTGGCCGAC ATGTACTCGC CGATTCGTGC CGGTTCCGAC
ATCACCTTCC TGCTGGGCGT GGTGAATTAT TTGTTGAGCC ACGACAAGGT GCAGATGCCG
TATGTGAAGG CGTATACCAA CGCCAGCCTG ATCGTGCGTG ACGATTACCA CTTTGATGAA
GGCATTTTCA GCGGTTACGA CGAAAAAGAG CGCAAGTATG ACCGCACCAG TTGGCAGTAT
GAACTGGATG AAAACGGCTT TGCCAAGCGC GACGATACCC TGAGCCATCC GCGTTGCGTC
TGGAACTTGT TGAAAGAGCA CGTCGGCCGT TATACGCCGG ATCTGGTGAC CAACGTGTGT
GGTACGCCGA AGCAGGATTT CCTGACCATT TGTGAGCAAC TGGCGTCAAC CTGCGTACCG
GATCGTACCG CGACCATCAT GTACGCCCTT GGCTGGACGC AGCACACCGC CGGCGCGCAA
ATTATCCGTA CCGCGGCGAT GGTACAGCTG TTGTTGGGTA ACGTCGGTAT GGCCGGCGGC
GGCGTGAACG CGCTGCGTGG TCACTCCAAC ATTCAGGGCT ACACCGATTT GGGGTTGCTG
TCGCTGAACC TGCCGGGCTA TATGCCGCTG CCGTCGGAAA AACAGACCTC GCTGACGATG
TATCTGGATC AGATAACGCC GAAAGCGTTG CTGGCGGATC AGGTCAACTA CTGGAAGAAC
ACGCCGAAGT TCTTTATCAG CATGATGAAG AGTTTCTGGG GTGACAACGC GACCAAAGAG
AATGACTGGG GTTACGACTG GTTGCCGAAG TGGGATAAAA GCTACGACGC GCTGGCGTAC
TCCCGCATGA TGCTGGAGGG CAAGGTCAAC GGCTATATCG TGCAGGGATT CAACCCGATG
GCCGCGTTTG CCGACTCCAA CCGCGCTCGC GATGCACTGA AAAAATTGAA ATACCTGGTG
ATTATCGATC CGCTGGCGAC GGAAACCTCC AACTTTTGGC AGAACCACGG CGAGCTCAAT
GATGTGGATT CGAGCCAGAT TCAGACCGAA GTATTCCGCT TGCCGTCCAG TTGCTTTGCC
GAGGAGAACG GCTCCATCGT TAACTCCGGG CGTTGGCTGC AATGGCACTA TCAGGGTGCC
GTGCCGCCGG GTGAAGCTCG CCACGACGGG GTGATTCTGG CCGGGTTGTT CCTGCGCCTG
CGTGAACTCT ATGCCAAAGA AGGCGGCGCC AATCCTGAAC CGGTGTTGAA CATGAGCTGG
AATTACCTGG AGCCGGAAGA CCCGTCCGCC GAGGAAATTA CCAAAGAAGC CAACGGCCGT
GCGCTGGCCG ATCTGTTCGA CGATAAAGGC AACTTGTTGC TGAAAAAAGG TCAGTTACTG
CCGGATTTCT CCCTGTTGCG TGATGATGGC ACCACCGCCA GTTTCTGCTG GATTTACGCC
GGTTCGTGGA CGGAAGCGGG CAACCAGATG GCGCGTCGCG ACAACGCCGA CCCGTCGGGC
CTGGGCTGCA CGCCGGGCTG GGCCTGGTGC TGGCCGCAGA ACCGCCGCAT TCTTTACAAC
CGCGCCTCGG CAGACCCGCA GGGTAAACCG TGGGATGCCA AACGAGAGCT GATTCGCTGG
AACGGCCAGC GGTGGACGGG GATCGACGTA CCGGACTTCG CCGTTACCGT GCCGCCGGGC
AGCGCCGCCG GTCCGTTCAT CATGAACGCC GAAGGGTTGG GCCGCCTGTT CGCTATCGAC
AAGATGGCCG AAGGTCCTTT CCCTGCGCAC TATGAACCGT TGGAATCGCC GTTGAAAAAA
AACCCGGTTT ACAGCAAGGT TCAGGTTAAC CCGGCAGCCC GTATTCTGCC GGCCGACCGC
CCGTATATCG GTACGGCAGA GGAGTTCCCG TTCGTCGCCA CCACCTATTC CATCACCGAG
TTGTTCCGCC ACTGGACGAA ACACGCGCGC CTTAACGCGA TTGTGCAGCC GGAGCAGTTT
GTAGAAATCG GTGAAGGGCT GGCGAAGCTG AAGGGTATCC AGGCTGGCGA TGTGGTAAAA
GTCAGCAGCA AACGAGGCTA TATCAAGGCG AAGGCCGTCG TCACCAAGCG TATCCGTACC
CTGACGATTC AGGGCAAACC GGTGGAAACC ATCGGCGTAC CCTGTCACTG GGGCTTTGAA
GGCACCACCC AGAAAGGCTT TATGGCGAAT ATCCTGACGC CGCATGTCGG TGACGCCAAC
AGTCAGACGC CGGAATACAA GGCGTTTCTG GTTAATGTGG AAAAAGCGTA G
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| Protein sequence | MQVSRRQFFK ICAGGMAGTT VTALGFSPSA ALAETRQYKL LRAKETRNNC TYCSVGCGIL
MYSLGDGAKN ATASIYHIEG DPDHPVSRGS LCPKGAGLVD FIHSDQRLKY PEYRAPGSDK
WQRISWEDAF DRIAHLMKKD RDANFVEKNA AGVTVNRWLT TGMLCSSAAS NETGILDQKF
ARALGMIGID TQARLCHGPT VSALAPTFGR GAMTNNWVDI KNANVILVMG GNPAEAHPVG
FKWAVEAKIH NGAKLIVVDP RFNRSAAVAD MYSPIRAGSD ITFLLGVVNY LLSHDKVQMP
YVKAYTNASL IVRDDYHFDE GIFSGYDEKE RKYDRTSWQY ELDENGFAKR DDTLSHPRCV
WNLLKEHVGR YTPDLVTNVC GTPKQDFLTI CEQLASTCVP DRTATIMYAL GWTQHTAGAQ
IIRTAAMVQL LLGNVGMAGG GVNALRGHSN IQGYTDLGLL SLNLPGYMPL PSEKQTSLTM
YLDQITPKAL LADQVNYWKN TPKFFISMMK SFWGDNATKE NDWGYDWLPK WDKSYDALAY
SRMMLEGKVN GYIVQGFNPM AAFADSNRAR DALKKLKYLV IIDPLATETS NFWQNHGELN
DVDSSQIQTE VFRLPSSCFA EENGSIVNSG RWLQWHYQGA VPPGEARHDG VILAGLFLRL
RELYAKEGGA NPEPVLNMSW NYLEPEDPSA EEITKEANGR ALADLFDDKG NLLLKKGQLL
PDFSLLRDDG TTASFCWIYA GSWTEAGNQM ARRDNADPSG LGCTPGWAWC WPQNRRILYN
RASADPQGKP WDAKRELIRW NGQRWTGIDV PDFAVTVPPG SAAGPFIMNA EGLGRLFAID
KMAEGPFPAH YEPLESPLKK NPVYSKVQVN PAARILPADR PYIGTAEEFP FVATTYSITE
LFRHWTKHAR LNAIVQPEQF VEIGEGLAKL KGIQAGDVVK VSSKRGYIKA KAVVTKRIRT
LTIQGKPVET IGVPCHWGFE GTTQKGFMAN ILTPHVGDAN SQTPEYKAFL VNVEKA
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