Gene Dd1591_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1379 
Symbol 
ID8118454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1567268 
End bp1568041 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content54% 
IMG OID644851774 
Producthistidine/lysine/arginine/ornithine transporter subunit 
Protein accessionYP_003003720 
Protein GI251788999 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.451284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAATA ACAAGCTGAT GGTGACGGAA TTACGTAAGC GTTATGGTCA GCATGAGGTG 
CTGAAAGGCA TTTCATTACA GGCTAAAGCC GGGGACGTTA TTTCGATTAT CGGGTCATCG
GGATCGGGTA AAAGCACCTT ATTACGGTGT ATTAATTTTC TGGAAAAACC TTGTGAAGGG
TCTATCCATG TGAATGGACA GGAAATTCAC ATGGTGCGGG ACAAAGACGG TCAGCTGAAG
GTATTCGATA AAAAACAGCT ACAGCTGCTG CGTACCCGGC TGACTATGGT ATTCCAGCAT
TTCAATTTGT GGAGCTTCAT GACGGCGCTG GAGAACGTGA TGGAAGCGCC GGTGCAGGTG
CTGGGGTTGA GCAAGGCGGA AGCCCGCAAG CGTGCGGAGT TCTACCTGAA TAAGGTGGGC
ATTACCGGTG CGTCGCAGGA GAAATACCCG GCCGATTTGT CCGGCGGCCA ACAGCAGCGC
GTGTCTATCG CCCGTGCGCT GGCGATGGAG CCGGAGGTGT TGCTGTTTGA CGAGCCGACG
TCGGCGCTAG ACCCTGAGCT TGTGGGCGAA GTATTGCGCA TCATGCAGCA ACTGGCGGAA
GAGGGCAAAA CCATGGTGGT GGTGACCCAC GAAATGGAGT TTGCCCGGCA TGTATCCAGC
CATGTGATCT TTTTGCATCA AGGGCTGGTG GAAGAGGAAG GGTCGCCGGA GGCGGTATTC
GGCAACCCGC AAAGCCCTCG TTTGCAGCAA TTCCTGTCTG GTGCGCTGAA GTAA
 
Protein sequence
MQNNKLMVTE LRKRYGQHEV LKGISLQAKA GDVISIIGSS GSGKSTLLRC INFLEKPCEG 
SIHVNGQEIH MVRDKDGQLK VFDKKQLQLL RTRLTMVFQH FNLWSFMTAL ENVMEAPVQV
LGLSKAEARK RAEFYLNKVG ITGASQEKYP ADLSGGQQQR VSIARALAME PEVLLFDEPT
SALDPELVGE VLRIMQQLAE EGKTMVVVTH EMEFARHVSS HVIFLHQGLV EEEGSPEAVF
GNPQSPRLQQ FLSGALK